Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04098 and BPUM_2461
See
Amino acid alignment /
Visit
BSNT_04098 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:37
# Commandline: needle
# -asequence dna-align/BSNT_04098___lonA.1.24716.seq
# -bsequence dna-align/BPUM_2461___lonA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04098___lonA-BPUM_2461___lonA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04098___lonA-BPUM_2461___lonA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04098___lonA
# 2: BPUM_2461___lonA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2362
# Identity: 1788/2362 (75.7%)
# Similarity: 1788/2362 (75.7%)
# Gaps: 74/2362 ( 3.1%)
# Score: 6532.5
#
#
#=======================================
BSNT_04098___ 1 ATGGCAGAAG-AATTAAAACGCAGCA--TCCCGCTCCTCCCTTTAAGAGG 47
||||||||.| |||.|||| ||.| |.||||||||.||.||..||||
BPUM_2461___l 1 ATGGCAGATGAAATCAAAA---AGAATGTTCCGCTCCTTCCATTGCGAGG 47
BSNT_04098___ 48 TTTATTAGTGTACCCGACGATGGTTTTGCATTTAGATGTAGGACGTGACA 97
|||..|.||.||.||.||.|||||.||||||||.||.||.|||||.||.|
BPUM_2461___l 48 TTTGCTTGTTTATCCAACAATGGTCTTGCATTTGGACGTTGGACGCGAAA 97
BSNT_04098___ 98 AGTCGGTTCAGGCTCTTGAACAGGCAATGATGCATGATCATATGATATTT 147
||||.|||||.||..|.|||||||||||||||.|.|||||||||||.|||
BPUM_2461___l 98 AGTCTGTTCAAGCATTAGAACAGGCAATGATGAACGATCATATGATTTTT 147
BSNT_04098___ 148 TTAGCCACTCAGCAGGATATTTCGATAGACGAACCTGGTGAAGACGAGAT 197
.||||.||.||||.|||.|||||.|||||.|||||.||||||||.||.||
BPUM_2461___l 148 CTAGCAACACAGCGGGAAATTTCAATAGATGAACCAGGTGAAGAGGAAAT 197
BSNT_04098___ 198 TTTCACTGTCGGCACCTATACAAAAATTAAGCAAATGCTGAAGCTTCCGA 247
|||||..|||||||||||.|||||||||||.||||||||||||||.||.|
BPUM_2461___l 198 TTTCAAAGTCGGCACCTACACAAAAATTAAACAAATGCTGAAGCTGCCAA 247
BSNT_04098___ 248 ACGGTACGATTCGTGTGTTGGTGGAGGGCCTCAAACGCGCCCAGATCGTC 297
|.||.|||||||||||..|.||.||.|||||.||.||.||.|||||||
BPUM_2461___l 248 ATGGAACGATTCGTGTACTCGTTGAAGGCCTAAATCGAGCACAGATCG-- 295
BSNT_04098___ 298 AAATACA-AT---GAACACGAGGATTACACGTCGGTCGACATTCAACTTA 343
||| || || ||.|..|||||.||.|||||.||||||||| ||...|
BPUM_2461___l 296 -AAT-CATATGTCGAGCTGGAGGACTATACGTCCGTCGACATT-AAAGAA 342
BSNT_04098___ 344 TT--CATGAAGATGATTCAAAAGATACAGAAGACGAAGCATTGATGCGGA 391
|| || |||||.||.|.|||.||..||||||..|||||..|.|||||.|
BPUM_2461___l 343 TTGGCA-GAAGAAGAATTAAAGGACGCAGAAGCAGAAGCCCTCATGCGTA 391
BSNT_04098___ 392 CTTTGCTAGACCACTTTGATCAGTACATAAAAATTTCTAAAAAAATCTCG 441
|.|||.||||.|||||||||||.||||||||||||||.|||||||||||.
BPUM_2461___l 392 CATTGTTAGATCACTTTGATCAATACATAAAAATTTCAAAAAAAATCTCA 441
BSNT_04098___ 442 GCCGAAACGTACGCCGCGGTTACTGATATCGAAGAGCCGGGGAGAATGGC 491
||.|||||.||.||..|.||.||.|||||.||.||.||||||||||||||
BPUM_2461___l 442 GCTGAAACATATGCAACAGTAACAGATATTGAGGAACCGGGGAGAATGGC 491
BSNT_04098___ 492 AGACATCGTTGCTTCTCATCTGCCCCTTAAACTAAAGGATAAGCAGGATA 541
|||.||||||||||||||.||.||.||||||.|||||||.||.||.||..
BPUM_2461___l 492 AGATATCGTTGCTTCTCACCTACCGCTTAAATTAAAGGACAAACAAGAAG 541
BSNT_04098___ 542 TTTTAGAAACGGCTGATGTCAAAGACAGGCTGAACAAGGTCATTGATTTT 591
|..|.|||||.|..|||||.|||.|..||||||||..||||||....||.
BPUM_2461___l 542 TGCTCGAAACAGTGGATGTTAAAAAACGGCTGAACCGGGTCATCAGCTTA 591
BSNT_04098___ 592 ATTAATAATGAAAAAGAAGTGCTGGAGATTGAGAAAAAAATCGGCCAGCG 641
|||.|.||||||||||||||.||.||||||||.||.||||||||.|||||
BPUM_2461___l 592 ATTCACAATGAAAAAGAAGTACTCGAGATTGAAAAGAAAATCGGGCAGCG 641
BSNT_04098___ 642 CGTCAAACGTTCGATGGAGCGTACGCAGAAGGAATACTACTTGCGAGAAC 691
|||.||||||||.|||||.||.|||||.||.|||||.||.||.||.||||
BPUM_2461___l 642 CGTGAAACGTTCAATGGAACGGACGCAAAAAGAATATTATTTACGTGAAC 691
BSNT_04098___ 692 AAATGAAGGCGATTCAAAAAGAGCTTGGCGATAAAGAAGGCAAAACTGGC 741
|||||||.||.||||||||.||||||||.||.||||||||.|||||||||
BPUM_2461___l 692 AAATGAAAGCCATTCAAAAGGAGCTTGGAGACAAAGAAGGGAAAACTGGC 741
BSNT_04098___ 742 GAAGTTCAG-------ACG-CTGACGGAAAAAATCGAAGAAGCAGGCATG 783
|||| |||| |.| || ||||||||||||.|..|||||
BPUM_2461___l 742 GAAG-TCAGTTCTTTAATGTCT-------AAAATCGAAGAATCGAGCATG 783
BSNT_04098___ 784 CCTGATCATGTGAAGGAAACAGCGCTTAAAGAATTGAACAGATATGAAAA 833
||.|||..|||....|||||.|||||.||||||||||||.|.||||||||
BPUM_2461___l 784 CCAGATTCTGTTCGTGAAACGGCGCTCAAAGAATTGAACCGTTATGAAAA 833
BSNT_04098___ 834 AATTCCGTCAAGTTCTGCGGAAAGCTCCGTGATCCGCAACTATATCGACT 883
||||||.|||||.|||||.||.|||||.|||||.||.||.|||||.||.|
BPUM_2461___l 834 AATTCCTTCAAGCTCTGCTGAGAGCTCTGTGATTCGAAATTATATTGATT 883
BSNT_04098___ 884 GGCTGGTTGCTCTTCCGTGGACGG-AT-GAAACAGATGATAAGCTTGATT 931
|||||.|||..||.|||||| || || .|.|||||.|||...||.||||
BPUM_2461___l 884 GGCTGATTGGCCTCCCGTGG--GGTATCTATACAGAAGATCGTCTCGATT 931
BSNT_04098___ 932 TGAAAGAAGCAGG----ACGTCTCTTGGACGAAGAGCACCACGGGCTAGA 977
|.|||...|||.| | |.||.||.||.|||||.||||||||.||
BPUM_2461___l 932 TAAAAATTGCAAGTGAAA----TTTTAGATGATGAGCATCACGGGCTGGA 977
BSNT_04098___ 978 AAAAGTAAAAGAAC--GTATTTTAGAATATTTGGCTGTCCAGAAGCTGAC 1025
|||.||.||||||| |||.|| ||||||.|.|||||.||.||||||||
BPUM_2461___l 978 AAAGGTCAAAGAACGAGTACTT--GAATATCTTGCTGTACAAAAGCTGAC 1025
BSNT_04098___ 1026 CAAATCCCTGAAAGGCCCGATTCTCTGTTTGGCAGGACCTCCAGGTGTCG 1075
|||.||..|.|||||.||||||||.|||||.||||||||||||||.||||
BPUM_2461___l 1026 CAATTCTTTAAAAGGACCGATTCTTTGTTTAGCAGGACCTCCAGGAGTCG 1075
BSNT_04098___ 1076 GAAAAACGTCTTTAGCCAAATCAATTGCAAAA--AGCTTGGGA-CGCAAA 1122
|.||||||||..|.||||||||.|||||.||| | ||| || ||.||.
BPUM_2461___l 1076 GGAAAACGTCACTTGCCAAATCGATTGCCAAATCA-CTT--GACCGAAAG 1122
BSNT_04098___ 1123 TTCGTCAGAATCTCACTCGGAGGAGTACGGGACGAATCAGAGATACGCGG 1172
||..||.|..|.||.||.||.||.||.||.||.||.||.|||||.||.||
BPUM_2461___l 1123 TTTATCCGTGTTTCCCTTGGCGGTGTTCGCGATGAGTCTGAGATTCGTGG 1172
BSNT_04098___ 1173 ACACAGACGGACCTATGTCGGAGCAATGCCTGGACGTATTATTCAAGGGA 1222
|||.|||.|.||.|||||.||.||||||||.||||||||.||||..||.|
BPUM_2461___l 1173 ACATAGAAGAACGTATGTAGGGGCAATGCCAGGACGTATCATTCGCGGAA 1222
BSNT_04098___ 1223 TGAAAAAAGCGGGCAAGCTGAATCCGGTCTTCTTATTAGACGAAATTGAC 1272
|||..||.||.||.|.|.||||||||||.|||.|.|||||.||||||||.
BPUM_2461___l 1223 TGAGCAAGGCAGGAACGATGAATCCGGTTTTCCTTTTAGATGAAATTGAT 1272
BSNT_04098___ 1273 AAAATGTCATCTGATTTTAGAGGAGACCCATCATCCGCTATGCTTGAAGT 1322
||.|||||.||||||||||||||.||.|||||.||.||.|||||||||||
BPUM_2461___l 1273 AAGATGTCCTCTGATTTTAGAGGTGATCCATCTTCTGCAATGCTTGAAGT 1322
BSNT_04098___ 1323 GCTT-GATCCAGAGCAAAA-CAGCAGCTTCAGTGATCACTATATTGAAGA 1370
||| |||||||||||||| || .|.||||||||||||||||||||||||
BPUM_2461___l 1323 -CTTAGATCCAGAGCAAAATCA-TAACTTCAGTGATCACTATATTGAAGA 1370
BSNT_04098___ 1371 AACCTTTGATTTATCCAAAGTGCTGTTTATCGCAACGGCAAACAATTTGG 1420
|||.||||||||.||..|||||.|||||||.||.||.||.||||||||.|
BPUM_2461___l 1371 AACATTTGATTTGTCTCAAGTGTTGTTTATTGCCACTGCCAACAATTTAG 1420
BSNT_04098___ 1421 CCACAATCCCGGGCCCGCTCAGAGACAGAATGGAAATTATTAATATCGCA 1470
|.||.||.||.||.||.||..|.||.||||||||.|||||.|..||.|||
BPUM_2461___l 1421 CAACCATTCCAGGTCCACTTCGTGATAGAATGGAGATTATCACGATTGCA 1470
BSNT_04098___ 1471 GGCTACACAGAAATAGAAAAACTTGAAATCGTAAAGGATCA-CTTGCTTC 1519
||.||.|||||..|.||||||...|||||.||.||.||.|| ||| ||.|
BPUM_2461___l 1471 GGGTATACAGAGGTTGAAAAAGCAGAAATTGTGAAAGACCATCTT-CTGC 1519
BSNT_04098___ 1520 CAAAGCAAATCAAAGAACACGGGCTGAAGAAAAGCAACCTGCAGCTGCGT 1569
|.|||||..|.||.||.|||||..|.||||||.|.|||.|||||||.|||
BPUM_2461___l 1520 CGAAGCAGCTAAAGGAGCACGGATTAAAGAAAGGGAACTTGCAGCTTCGT 1569
BSNT_04098___ 1570 GATCAG--GCGATTCTTGATATTATCCGCTACTATACGAGAGAAGCTGGT 1617
|| || ||||||..|||||..||.|||||.||.||.||||||||.|||
BPUM_2461___l 1570 GA--AGCCGCGATTTATGATACGATTCGCTATTACACAAGAGAAGCGGGT 1617
BSNT_04098___ 1618 GTGAGAAGCCTTGAACGCCAGCTTGCCGCGATTTGCCGTAAAGCTGCAAA 1667
||..|..|..|.||.||.||||||||.|||||.|||||||||||.||||.
BPUM_2461___l 1618 GTTCGTGGATTAGAGCGTCAGCTTGCGGCGATATGCCGTAAAGCAGCAAG 1667
BSNT_04098___ 1668 AGCCATTGTTGCTGAAGAGCGAAAACGGATTACGGTTACTGAGAAGAACC 1717
|||.|||||.||||||||.||.|||||.||.||.||.||.||.||||||.
BPUM_2461___l 1668 AGCAATTGTGGCTGAAGACCGCAAACGCATCACAGTGACGGAAAAGAACT 1717
BSNT_04098___ 1718 T-TCAAGACTTTATCGGAAAACGTATTTTCAGATATGGACAAGCTGAAAC 1766
| || .||.|||.||||||||.|..|||.|.|.|||||.||.||||||||
BPUM_2461___l 1718 TATC-TGAATTTCTCGGAAAAAGACTTTACCGTTATGGTCAGGCTGAAAC 1766
BSNT_04098___ 1767 AGA-GGATCAGGTTGGTGTAGTGACAGGGCTTGCTTATACAACCGTTGGC 1815
|| .||.||.||.||.||.||.|||||.|||||.|||||.||.|||||.
BPUM_2461___l 1767 -GACAGACCAAGTGGGAGTTGTTACAGGACTTGCGTATACGACTGTTGGG 1815
BSNT_04098___ 1816 GGAGATACGCTGTCGATTGAAGTATCGCTTTCTCCGGGGAAAGGGAAATT 1865
||.||.||..||||||||||.|||||||||||||||||.|||||.||..|
BPUM_2461___l 1816 GGGGACACCTTGTCGATTGAGGTATCGCTTTCTCCGGGTAAAGGCAAGCT 1865
BSNT_04098___ 1866 AATCCTGACAGGAAAGCTCGGAGATGTTATGAGAGAGTCAGCTCAGGCTG 1915
..|..|.|||||.|||||.||.|||||.||||||||.||.||.|||||.|
BPUM_2461___l 1866 GTTGTTAACAGGTAAGCTAGGTGATGTCATGAGAGAATCTGCACAGGCGG 1915
BSNT_04098___ 1916 CATTCAGCTATGTGCGATCCAAAACAGAAGAACTTGGCATTGAACCTGAC 1965
|||||||.|||.|.||.||.||..||||.|||||...||||||.|||.|.
BPUM_2461___l 1916 CATTCAGTTATATTCGTTCGAAGGCAGATGAACTGAACATTGATCCTAAT 1965
BSNT_04098___ 1966 TTTCATGAGAAGTATGATATTCATATACATGTACCAGAGGGTGCGGTGCC 2015
|||.||||.|||.|||||||||||||.|||||.||||||||||||||.||
BPUM_2461___l 1966 TTTAATGAAAAGCATGATATTCATATCCATGTTCCAGAGGGTGCGGTTCC 2015
BSNT_04098___ 2016 AAAAGATGGTCCGTCAGCTGGTATTACGATGGCAACAGCGCTTGTTTCTG 2065
|||.||.||.||.|||||||||||.||.||.||.||.||.|||||.||.|
BPUM_2461___l 2016 AAAGGACGGGCCATCAGCTGGTATCACCATTGCGACGGCTCTTGTATCAG 2065
BSNT_04098___ 2066 CTTTAACGGGACGGGCGGTTTCGCGTGAAGTCGGCATGACTGGGGAAATC 2115
|..|.||.|||||..|.||.||....||.||.||.|||||.||.||.||.
BPUM_2461___l 2066 CCCTCACAGGACGACCTGTGTCAAAAGAGGTTGGTATGACAGGAGAGATT 2115
BSNT_04098___ 2116 ACGCTTCGCGGGCGCGTGCTGCCGATCGGCGGCTTAAAGGAAAAAGCGCT 2165
|||||..|.||..|.|||||.||.||.|||||..||||.||||||||..|
BPUM_2461___l 2116 ACGCTAAGAGGAAGAGTGCTTCCAATTGGCGGACTAAAAGAAAAAGCATT 2165
BSNT_04098___ 2166 TGGCGCACATAGAGCGGGATTAACGACCATTATTGCGCCTAAAGATAATG 2215
.||.||||||.|.||.|||.|.|..|||||||||...||.||.||.||||
BPUM_2461___l 2166 AGGTGCACATCGCGCAGGACTGAAAACCATTATTCTTCCAAAGGACAATG 2215
BSNT_04098___ 2216 AAAAAGATATAGAGGATATTCCGGAAAGCGTCAGGGAGGGGCTGACATTT 2265
|.||.|||||.||.||||||||.|||||.||.||.||.||.||.||.|||
BPUM_2461___l 2216 AGAAGGATATTGATGATATTCCTGAAAGTGTGAGAGAAGGACTAACCTTT 2265
BSNT_04098___ 2266 ATATTGGCGTCCCACTTAGACGAGGTTTTGGAACATGCCTTAGTAGGAGA 2315
||...||..||.||.|||||.|||||..|.||..|.||.||.||||||||
BPUM_2461___l 2266 ATTCCGGTCTCGCATTTAGATGAGGTGCTTGAGAAAGCGTTGGTAGGAGA 2315
BSNT_04098___ 2316 --GAAGAAATGA 2325
|||| ||||
BPUM_2461___l 2316 GGGAAG--ATGA 2325
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.