Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04097 and BPUM_2460

See Amino acid alignment / Visit BSNT_04097 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:37
# Commandline: needle
#    -asequence dna-align/BSNT_04097___engB.1.24716.seq
#    -bsequence dna-align/BPUM_2460___engB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04097___engB-BPUM_2460___engB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04097___engB-BPUM_2460___engB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04097___engB
# 2: BPUM_2460___engB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 600
# Identity:     453/600 (75.5%)
# Similarity:   453/600 (75.5%)
# Gaps:          24/600 ( 4.0%)
# Score: 1685.0
# 
#
#=======================================

BSNT_04097___      1 ATGAAAGTCACAAAGTCAGAAATCGTGATCAGTGCAGTAAAACCGGAACA     50
                     ||||||||.|||||.|||||.|||||.||.|||||.||.|||||.||.||
BPUM_2460___e      1 ATGAAAGTAACAAAATCAGATATCGTCATTAGTGCGGTTAAACCAGAGCA     50

BSNT_04097___     51 GTACCCTGAA--GGGGGGCTTCCGGAAATCGCATTGGCCGGAAGATCGAA     98
                     ||||||  ||  |||||.||.||.||||||||..|.||.|||.||||.||
BPUM_2460___e     51 GTACCC--AAGCGGGGGACTGCCTGAAATCGCTCTTGCTGGACGATCAAA     98

BSNT_04097___     99 CGTAGGAAAATCGTCTTTTATCAATTCATTAATCAATCGCAAAAATCTTG    148
                     .||.||.|||||.||.||.|||||.|||||.||.|||||.||||||.|.|
BPUM_2460___e     99 TGTTGGGAAATCCTCGTTCATCAACTCATTGATTAATCGTAAAAATTTAG    148

BSNT_04097___    149 CGAGAACGTCATCAAAGCCGGGAAAAACACAAACGCTTAATTTCTACATT    198
                     ||.|.|||||.||.||.||.||.||.||.||||||||||||||||||||.
BPUM_2460___e    149 CGCGTACGTCTTCTAAACCAGGTAAGACCCAAACGCTTAATTTCTACATC    198

BSNT_04097___    199 ATCAATGATGAGCTGCATTTTGTGGATGTGCCGGGCTACGGTTTTGCCAA    248
                     |||||||||..|||.|||||||||||.||.||.||.|||||.|||||.||
BPUM_2460___e    199 ATCAATGATATGCTCCATTTTGTGGACGTTCCAGGTTACGGCTTTGCTAA    248

BSNT_04097___    249 AGTGTCAAAGTCTGAGCGTGAAGCATGGGGCAGAATGATTGAAACCTATA    298
                     ||||||||||.|.|||||.||.||.|||||.||||||||.|||||.||||
BPUM_2460___e    249 AGTGTCAAAGACAGAGCGCGAGGCCTGGGGTAGAATGATCGAAACGTATA    298

BSNT_04097___    299 TCACGACACGCGAGGAATTAAAAGCTGTGGTGCAGATCGTTGATTTGCGG    348
                     |.||.|..||.||.|||||||||||.||.||.||.||.||.||..||||.
BPUM_2460___e    299 TTACAATGCGTGAAGAATTAAAAGCAGTCGTCCAAATTGTGGACCTGCGT    348

BSNT_04097___    349 CATGCGCCATC--TAATGATGATGTACAGATGTATGAATTTTTAAAGTAT    396
                     |||..||||||  ||  ||||||||..|.|||||||||||..|.||.|||
BPUM_2460___e    349 CATAAGCCATCAGTA--GATGATGTGAACATGTATGAATTCCTGAAATAT    396

BSNT_04097___    397 TACGGCATTCCTGTTATTGTTATCGCTACAAAGGCGGATAAGATCCCGAA    446
                     |||||..|||||||.||.||.|||||.||||||||.||.||.||.||.||
BPUM_2460___e    397 TACGGAGTTCCTGTGATCGTCATCGCAACAAAGGCAGACAAAATTCCAAA    446

BSNT_04097___    447 AGGCAAATGGGACAAACACGCGAAGGTTGTCCGACAAACATTAAATATTG    496
                     ||||||||||||.|||||.|||||.||.|||..|||.||..|..|.||||
BPUM_2460___e    447 AGGCAAATGGGAAAAACATGCGAAAGTCGTCAAACAGACGCTTGACATTG    496

BSNT_04097___    497 ----ATCCGGAAGACGAGCTAATTCTCTTTTCCTCAGAAACGAAAAAGGG    542
                         |||    |||.||.|||.|.||.||.||.||.|||||.||||||||
BPUM_2460___e    497 CCCCATC----AGATGAACTAGTCCTATTCTCTTCTGAAACAAAAAAGGG    542

BSNT_04097___    543 AAAAGACGAAGCTTGGGGAGCGATC----AAAAAAATGATAAACCGGTAG    588
                     ||||||||||||.|||...||.|||    .|||.|.|.|||||    ||.
BPUM_2460___e    543 AAAAGACGAAGCCTGGAATGCCATCCTTGCAAAGATTAATAAA----TAA    588


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