Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04069 and BPUM_2443
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:34
# Commandline: needle
# -asequence dna-align/BSNT_04069___mreB.1.24716.seq
# -bsequence dna-align/BPUM_2443___mreB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04069___mreB-BPUM_2443___mreB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04069___mreB-BPUM_2443___mreB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04069___mreB
# 2: BPUM_2443___mreB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1028
# Identity: 803/1028 (78.1%)
# Similarity: 803/1028 (78.1%)
# Gaps: 22/1028 ( 2.1%)
# Score: 3129.0
#
#
#=======================================
BSNT_04069___ 1 ATGTTTGGAATTGGTGCTAGAGACCTTGGTATAGATCTTGGAACTGCGAA 50
|||||||||||||||.|.|.|||||||||.||||||||||||||.|||||
BPUM_2443___m 1 ATGTTTGGAATTGGTACAAAAGACCTTGGAATAGATCTTGGAACAGCGAA 50
BSNT_04069___ 51 TACGCTTGTTTTTGTAAAAGGAAAAGGAATTGTTGTGAGAGAGCCGTCAG 100
|||||||||||||.|.|||||||||||.||||||||.|||||.||.||.|
BPUM_2443___m 51 TACGCTTGTTTTTATTAAAGGAAAAGGCATTGTTGTAAGAGAACCTTCGG 100
BSNT_04069___ 101 TTGTCGCTTTGCAGACGGATACGAAATCAATTGTCGCTGTCGGAAATGAT 150
|.||.||.|||.|.||.||||||||.||.||.||.||.||||||||||||
BPUM_2443___m 101 TCGTAGCCTTGGAAACTGATACGAAGTCTATAGTGGCAGTCGGAAATGAT 150
BSNT_04069___ 151 GCGAAAAATATGATTGGACGGACACCGGGCAACGTGGTGGCTCTGCGCCC 200
||.|..|||||||||||.||.|||||.||.||.||.|||||.||.|||||
BPUM_2443___m 151 GCTAGGAATATGATTGGCCGTACACCTGGTAATGTTGTGGCACTACGCCC 200
BSNT_04069___ 201 GATGAAAGACGGCGTTATCGCTGATTATGAAACAACGGCGACGATGATGA 250
||||||||||||.||.||.||.|||||.||.||.||.||.||.|||||||
BPUM_2443___m 201 GATGAAAGACGGAGTCATTGCAGATTACGAGACGACAGCAACAATGATGA 250
BSNT_04069___ 251 AATATTACATCAATCAGGCCATAAAAAATAAAGGTATGTTTGCCAGAAAA 300
||||||||||.|||||.||..|||||...|||||..|.|||||..|.|||
BPUM_2443___m 251 AATATTACATTAATCAAGCATTAAAAGGCAAAGGGCTTTTTGCTCGTAAA 300
BSNT_04069___ 301 CCATATGTAATGGTATGTGTCCCATCAGGCATTACAGCTGTTGAAGAACG 350
||.||.||.|||||||||||.||.||.||.|||||||||||.||||||||
BPUM_2443___m 301 CCTTACGTGATGGTATGTGTACCGTCTGGTATTACAGCTGTAGAAGAACG 350
BSNT_04069___ 351 CGCTGTTATCGATGCGACAAGACAGGCGGGAGCGCGTGACGCGTATCCGA 400
.||.||.||.|||||.||.|||||.||.||.||.||||||||.||.||||
BPUM_2443___m 351 TGCAGTCATTGATGCAACGAGACAAGCCGGTGCACGTGACGCATACCCGA 400
BSNT_04069___ 401 TTGAAGAGCCTTTTGCCGCAGCAATCGGGGCCAATCTGCCAGTTTGGGAA 450
||||||||||.|||||.|||||.||.||.||.||.||.||.||.|||||.
BPUM_2443___m 401 TTGAAGAGCCATTTGCGGCAGCGATTGGTGCGAACCTTCCTGTATGGGAG 450
BSNT_04069___ 451 CCGACTGGAAGCATGGTTGTTGATATCGGGGGCGGTACGACAGAAGTTGC 500
||.||.||||||||||||||.||.||.||.||||||||.|||||.||.||
BPUM_2443___m 451 CCAACAGGAAGCATGGTTGTAGACATTGGCGGCGGTACAACAGAGGTAGC 500
BSNT_04069___ 501 GATTATTTCCCTCGGAGGCATCGTAACGTCTCAGTCAATCCGTGTAGCCG 550
.||||||||.||.||.||.||.||.||.||.||.||||||||.||.||.|
BPUM_2443___m 501 CATTATTTCTCTTGGCGGTATTGTGACATCACAATCAATCCGCGTGGCAG 550
BSNT_04069___ 551 GTGATGAGATGGATGACGCGATTATCAACTACATCAGAAAAACGTACAAT 600
|.|||||.||||||||.||.||.|.||.|||||||.|.||||||||.||.
BPUM_2443___m 551 GAGATGAAATGGATGATGCAATCAGCAGCTACATCCGTAAAACGTATAAC 600
BSNT_04069___ 601 CTGATGATCGGTGACCGTACGGCTGAAGCGATTAAAATGGAAATCGGATC 650
||||||||||||||.||||||.|.|||||.|||||||||||||||||.||
BPUM_2443___m 601 CTGATGATCGGTGATCGTACGTCAGAAGCTATTAAAATGGAAATCGGTTC 650
BSNT_04069___ 651 TGCAGAAGCTCCTGAAGAATCCGACAACATGGAAATCCGCGGACGCGA-- 698
||| |.|| |||||.|.|...||..|.|||||.||.||.||.||.||
BPUM_2443___m 651 TGC-GCAG--CCTGATGTACATGATGAGATGGACATTCGGGGGCGTGACC 697
BSNT_04069___ 699 TTTGCTGACAGGTCTGCCGAAAACAATTGAAATTACAGGAAAAGAGATTT 748
||| |.|||||||||||.||||||||....|||||||.|.|.||||||.
BPUM_2443___m 698 TTT--TAACAGGTCTGCCAAAAACAATCTCGATTACAGCAGATGAGATTG 745
BSNT_04069___ 749 CTAATGCTCTACGCGACACTGTATCTACAATTGTCGAAGCAGTGAAGAGC 798
|.||.||.||.|||||.||.||....||.|||||.||.||.|||||.|..
BPUM_2443___m 746 CAAAAGCGCTTCGCGATACAGTGGAAACCATTGTTGATGCGGTGAAAATG 795
BSNT_04069___ 799 ACACTCGAAAAAACACCGCCTGAGCTTGCAGCAGATATCATGGACAGAGG 848
|||||.||||||||||||||||||||.|||||||||||.||||||.|.||
BPUM_2443___m 796 ACACTTGAAAAAACACCGCCTGAGCTCGCAGCAGATATTATGGACCGCGG 845
BSNT_04069___ 849 TATAGTGTTAACCGGCGGCGGAGC---GCTTTTGCGCAATTTGGACAAAG 895
.||.||.|||||.|||||.||.|| |||| ||.|||.|.|||||||
BPUM_2443___m 846 AATCGTTTTAACTGGCGGTGGTGCATTGCTT---CGTAATCTTGACAAAG 892
BSNT_04069___ 896 TCATCAGCGAAGAAACAAAAATGCCGGTCCTTATCGCCGAAGATCCGCTT 945
|.||.||.||.||.||.||.|||||.|||.||||.||.||||||||||||
BPUM_2443___m 893 TGATTAGTGATGAGACGAAGATGCCAGTCATTATTGCGGAAGATCCGCTT 942
BSNT_04069___ 946 GATTGTGTAGCGATCGGAACAGGGAAAGCACTGGAGCACATCCATCTTTT 995
||.|||||.||||||||||||||.||||||||.|||||.||.|||.|.||
BPUM_2443___m 943 GACTGTGTGGCGATCGGAACAGGAAAAGCACTAGAGCATATTCATTTGTT 992
BSNT_04069___ 996 CAAAGGGAAA--ACTAGATAA------- 1014
||||||.||| |..||||||
BPUM_2443___m 993 CAAAGGAAAATCAAAAGATAATCGATAA 1020
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