Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04061 and BPUM_2437
See
Amino acid alignment /
Visit
BSNT_04061 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:34
# Commandline: needle
# -asequence dna-align/BSNT_04061___spoIVFB.1.24716.seq
# -bsequence dna-align/BPUM_2437___spoIVFB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04061___spoIVFB-BPUM_2437___spoIVFB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04061___spoIVFB-BPUM_2437___spoIVFB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04061___spoIVFB
# 2: BPUM_2437___spoIVFB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 907
# Identity: 606/907 (66.8%)
# Similarity: 606/907 (66.8%)
# Gaps: 77/907 ( 8.5%)
# Score: 1753.5
#
#
#=======================================
BSNT_04061___ 1 TTGAATAAATGGCTCGACCTTAT-CTTA--AAGATCCATGTGCATCCTTT 47
|||||||.||||||.| |.|| ||.| ||.||.||..|.|||||..|
BPUM_2437___s 1 TTGAATAGATGGCTGG---TCATGCTGACGAAAATTCACATTCATCCGCT 47
BSNT_04061___ 48 TCTTTGGATTATCGCGGCG-CTGGGCTTGCTCACAGGCCATATGAAAGCA 96
.||.||||||.|...|||| .||.|.|| |||.|.||.||.||.||..|.
BPUM_2437___s 48 GCTGTGGATTGTGATGGCGTTTGCGATT-CTCTCTGGTCAAATCAAGCCG 96
BSNT_04061___ 97 TTATTTTGTCTGCTCCTGATTGTATTGATTCATGAGCTGGGGCATGCTGC 146
.||.|||||||||||.|.||.||.||..|.||||||||.||.|||||.||
BPUM_2437___s 97 CTACTTTGTCTGCTCATCATCGTCTTTGTCCATGAGCTTGGACATGCAGC 146
BSNT_04061___ 147 TCTGGCTGTGTTTTTTTC-TTGGAGAATCAAGCGTGTTTTTTTGCTGCCG 195
..|.||| ||.|.||.|| ||||.|.||...|||..|||||.|.||.|||
BPUM_2437___s 147 GGTTGCT-TGCTATTATCATTGGCGCATTCGGCGGATTTTTCTACTCCCG 195
BSNT_04061___ 196 TTTGGGGGAACGGTCGAAGTGGAAGAGCACGGGAATCGGCCGTTAAAGGA 245
|||||.|||.||||.|||||.||||||||.|||||.||.|||.|||||||
BPUM_2437___s 196 TTTGGCGGAGCGGTAGAAGTAGAAGAGCATGGGAACCGCCCGCTAAAGGA 245
BSNT_04061___ 246 AGAGTTTGCGGTCATTAT-TGCCGGCCCTCTTCAGCACATCTG----GCT 290
||||.|.|||||||||.| || |||.||.|||||||| || |||
BPUM_2437___s 246 AGAGCTGGCGGTCATTTTATG-CGGGCCGCTTCAGCA----TGTACCGCT 290
BSNT_04061___ 291 TCAGTTTGCCGCCTGGATGCT--TGCAGAAGTCTCAGTGATTCATCAGCA 338
.|||.||...||.|||.|..| ||.||...|||| |.||| ||| ||
BPUM_2437___s 291 CCAGCTTATGGCGTGGTTTTTTATGGAGGCTTCTC--TTATT--TCA-CA 335
BSNT_04061___ 339 -TACCTTTGAAC--TCTTCACCTTTTATAATCTTTCTATCTTATTTGTCA 385
.||.|||..|| |.|||||.|||||||||.|..|.||.||..||||.|
BPUM_2437___s 336 CGACATTTTTACGATGTTCACTTTTTATAATATGGCGATTTTCCTTGTGA 385
BSNT_04061___ 386 ATTTACTGCCGATCTGGCCGCTGGATGGAGGAAAACTGTTATTTTTGTTG 435
||.|..|||||||.||||||||.|||||.||||||.|.||.||||||.|.
BPUM_2437___s 386 ATCTTTTGCCGATTTGGCCGCTAGATGGCGGAAAATTATTCTTTTTGCTC 435
BSNT_04061___ 436 TTTTCCAAACAGC----TGCCTTTTCAAAAG-GCTC--ACCGGCTTAATC 478
|| |.|||| |.||.||||.||.| ||.| ||| |||....
BPUM_2437___s 436 TT-----ATCAGCATATTACCCTTTCCAACGTGCACATACC--CTTGCCA 478
BSNT_04061___ 479 TAAAAACGTCGC---TCTGCTTCTGCCTGTTGCTCGGGTGCTGGGTTTTA 525
|||||...||.| |||..|||.|.||.|||...||..|.|...||||.
BPUM_2437___s 479 TAAAAGGCTCTCTTGTCTTTTTCAGTCTATTGACAGGCGGATTACTTTTG 528
BSNT_04061___ 526 TTCGTGATTCCTCTGCAGATCAGCGCATGGGTTTTG-----TTTGTCTTT 570
||.|.| ||.||.||..|||.||..|||||..|| || |||
BPUM_2437___s 529 TTTGCG---CCGCTTCAATTCAACGGCTGGGTACTGCTCACTT----TTT 571
BSNT_04061___ 571 CTGGCTGTTTCCTTGTTTGA-GGAATATCGGCAAAGGCACTATATCCATG 619
..|.||.||..||.| ||| |||..|.|||||..||||.|||.||...|
BPUM_2437___s 572 TAGCCTATTCACTCG--TGATGGAGCACCGGCAGCGGCATTATGTCAGGG 619
BSNT_04061___ 620 TGAGATTTCTCCTCGAAAGGTATTACGGAAAAAACAGGG----AGCTTGA 665
|..|.|||.|.||.|||.|.||||||||.||||| ||.| ||.|.||
BPUM_2437___s 620 TTCGCTTTTTACTAGAACGCTATTACGGTAAAAA-AGAGCAAAAGGTAGA 668
BSNT_04061___ 666 GAAACTTCTGCCGCTGACAGTAAAGGCGGAGGATAAAGTCTATCATGTGA 715
.||.||..|.||.||||.||..|..||.|||||.|||.|.|||.|.||.|
BPUM_2437___s 669 AAAGCTGATTCCTCTGAGAGCGAGCGCTGAGGAAAAAATATATGAAGTCA 718
BSNT_04061___ 716 TGGC-CGAGTTCAAACGTGGCTGTAAGCATCCGATTATTATAGAAAAATC 764
|||| ||| |||.||.|.|||||||||||||||||||||||.||||.|..
BPUM_2437___s 719 TGGCGCGA-TTCCAAAGAGGCTGTAAGCATCCGATTATTATTGAAAGAGA 767
BSNT_04061___ 765 AGGC--CAAAAGCTCAGCCAGCTTGACGAGAATGAAGTGCTGCACGCTTA 812
.||| .|||| |.|||||||||||.||.||||||.||||.||.||.||
BPUM_2437___s 768 TGGCTTGAAAA--TGAGCCAGCTTGATGAAAATGAACTGCTTCATGCGTA 815
BSNT_04061___ 813 CTTTGCCGAT--AAGCGGACGAATTCTTCCATGGAGGAGCTGCTTCTGCC 860
.|||.|.||| || |.||.|..||.||||||||.|||||.|||.||||
BPUM_2437___s 816 TTTTTCAGATCGAA--GAACCACCTCCTCCATGGAAGAGCTTCTTTTGCC 863
BSNT_04061___ 861 CTACTAA 867
.|||||.
BPUM_2437___s 864 GTACTAG 870
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.