Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04054 and BPUM_2432
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:33
# Commandline: needle
# -asequence dna-align/BSNT_04054___obgE.1.24716.seq
# -bsequence dna-align/BPUM_2432___obgE.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04054___obgE-BPUM_2432___obgE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04054___obgE-BPUM_2432___obgE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04054___obgE
# 2: BPUM_2432___obgE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1296
# Identity: 1010/1296 (77.9%)
# Similarity: 1010/1296 (77.9%)
# Gaps: 18/1296 ( 1.4%)
# Score: 3826.5
#
#
#=======================================
BSNT_04054___ 1 ATGTTTGTAGATCAGGTCAAAGTATATGTAAAAGGCGGCGACGGCGGCAA 50
|||||||||||||||||.|||||.|||||.||||||||.||||||||.||
BPUM_2432___o 1 ATGTTTGTAGATCAGGTTAAAGTGTATGTTAAAGGCGGTGACGGCGGAAA 50
BSNT_04054___ 51 CGGTATGGTTGCGTTTCGCCGTGAAAAATATGTGCCGAAAGGCGGCCCTG 100
|||||||||.||||||||.|||||||||||||||||.||||||||.||.|
BPUM_2432___o 51 CGGTATGGTGGCGTTTCGTCGTGAAAAATATGTGCCAAAAGGCGGACCGG 100
BSNT_04054___ 101 CCGGCGGTGACGGAGGAAAGGGAGGAGACGTCGTTTTTGAAGTAGATGAA 150
|.|||||.|||||.|||||.||.|.|||.||.||.|||||||||||.|||
BPUM_2432___o 101 CTGGCGGCGACGGTGGAAATGGTGCAGATGTGGTATTTGAAGTAGACGAA 150
BSNT_04054___ 151 GGTCTCCGCACCCTGATGGATTTTAGATACAAAAAACACTTTAAAGCGAT 200
||.|||.|.||..|||||||.|||.|.||||||...||.|||||.|||..
BPUM_2432___o 151 GGACTCAGAACATTGATGGACTTTCGTTACAAACGCCATTTTAAGGCGGA 200
BSNT_04054___ 201 TCGCGGCGAGCATGGCATGTCCAAAAACCAGCACGGACGAAATGCTGATG 250
||||||||||||.||.|||...|||||||||||.||.||||||||.||.|
BPUM_2432___o 201 TCGCGGCGAGCACGGAATGAGTAAAAACCAGCATGGCCGAAATGCGGAAG 250
BSNT_04054___ 251 ATATGGTCATTAAAGTTCCGCCGGGCACCGTTGTGACAGACGATGATACG 300
|.|||.|..|.|||||||||||.||.||.||||||||.||.|..||.||.
BPUM_2432___o 251 AAATGATTGTCAAAGTTCCGCCCGGTACGGTTGTGACGGATGCAGAGACA 300
BSNT_04054___ 301 AAACAGGTCATCGCTGATTTAACAGAGCACGGACAGCGGGCTGTCATTGC 350
.||||.||..|.||.||.|||||.|||||.||.||||||||.||||||||
BPUM_2432___o 301 GAACAAGTACTTGCAGACTTAACCGAGCATGGGCAGCGGGCAGTCATTGC 350
BSNT_04054___ 351 AAGAGGCGGAAGAGGCGGAAGAGGAAATAGCCGCTTTGCTACACCGGCTA 400
||.||||||..||||||||.||||||||...||.||.||.||||||||.|
BPUM_2432___o 351 AAAAGGCGGCCGAGGCGGACGAGGAAATTCACGTTTCGCAACACCGGCAA 400
BSNT_04054___ 401 ATCCCGCGCCTCAGCTTTCAGAAAACGGCGAGCCGGGAAAAGAACGCTAC 450
|.||.||.||.||||||||.|||||.||||||||.||.||||||||..||
BPUM_2432___o 401 ACCCTGCACCACAGCTTTCTGAAAATGGCGAGCCAGGTAAAGAACGTGAC 450
BSNT_04054___ 451 ATTGT--TCTT-GAATTAAAAGTGCTTGCAGATGTCGGACTTGTCGGGTT 497
|| |||| |||||||||||.|||||||||||.||||||||.||.||
BPUM_2432___o 451 ---GTCATCTTAGAATTAAAAGTACTTGCAGATGTTGGACTTGTAGGTTT 497
BSNT_04054___ 498 CCCGAGTGTGGGAAAATCTACTTTGCTGTCTGTTGTCTCATCTGCAAAAC 547
|||.|||||.||.||.||.||..||||.||..|||||||.|||||.||||
BPUM_2432___o 498 CCCAAGTGTCGGGAAGTCGACGCTGCTATCCATTGTCTCTTCTGCGAAAC 547
BSNT_04054___ 548 CGAAAATTGCGGACTATCACTTTACAACGCTTGTCCCAAATCTCGGCATG 597
|||||||||||||.|||||.||||||||||||||.||.||.||.||..|.
BPUM_2432___o 548 CGAAAATTGCGGATTATCATTTTACAACGCTTGTGCCGAACCTAGGGGTT 597
BSNT_04054___ 598 GTTGAAACGGATGACGGACGCAGCTTTGTCATGGCCGATTTGCCGGGGCT 647
||.|||||.|||||....||.|||||.||||||||.|||.||||.||.||
BPUM_2432___o 598 GTCGAAACAGATGATAACCGAAGCTTCGTCATGGCGGATCTGCCAGGACT 647
BSNT_04054___ 648 GATTGAAGGCGCACACCAAGGCGTCGGACTT-GGCCACCAGTTTTTGCGC 696
|||.||||||||.||..|||||||.|| ||| ||.||.||.|||||.||.
BPUM_2432___o 648 GATCGAAGGCGCGCATGAAGGCGTTGG-CTTAGGTCATCAATTTTTACGT 696
BSNT_04054___ 697 CATATTGAACGGACGAGGGTTATTGTTCATGTCATTGACATGTCAG-GCT 745
||.|||||.|||||..|.||.|||||||||||||||||.||||||| .||
BPUM_2432___o 697 CACATTGAGCGGACACGTGTCATTGTTCATGTCATTGATATGTCAGCACT 746
BSNT_04054___ 746 TAGAAGGCCGTGATCCATATGATGATTATCTTACGATTAACCAGGAGC-T 794
| |||||.|||||.||.||.||.||||||.|.||.||||||.|.|||| |
BPUM_2432___o 747 T-GAAGGACGTGACCCGTACGAAGATTATGTGACCATTAACGAAGAGCTT 795
BSNT_04054___ 795 GAGCGAGTACAATCTGCGTCTCACTGAGCGTCCGCAAATTATCGTTGCAA 844
|||| |.||||||.||.|..|.|||||||||||.|||||.||.||.||.|
BPUM_2432___o 796 GAGC-AATACAATATGAGATTGACTGAGCGTCCACAAATCATTGTAGCGA 844
BSNT_04054___ 845 ATAAAATGGACATGCCGGAGGCTGCGGAAAATCTCGAAGCCTTTAAAGAA 894
|.||||||||||||||.||.||.||.||.|||||.|..||.|||||||||
BPUM_2432___o 845 ACAAAATGGACATGCCAGATGCAGCTGACAATCTAGCGGCATTTAAAGAA 894
BSNT_04054___ 895 AAGCTGACGGATGATTATCCGGTATTCCCGATCAGTGCGGTGACAAGAGA 944
||..|.||||||||||||...||.|||||.||.||||||.|.||||||||
BPUM_2432___o 895 AAATTAACGGATGATTATAAAGTGTTCCCTATTAGTGCGATCACAAGAGA 944
BSNT_04054___ 945 AGGTCTGCGTGAGCTTCTGTTTGAGGTTGCCAATCAGCTTGAGAAC-ACA 993
|||.||.|||||||||.|.|||||..|.|||||||||||||| ||| ||.
BPUM_2432___o 945 AGGGCTTCGTGAGCTTTTATTTGAAATCGCCAATCAGCTTGA-AACAACT 993
BSNT_04054___ 994 CCGGAATTCCCGCTGTATGACGAGGAAGAGCTTACACAAAACCGTGTCAT 1043
||.|||||||||||.|||.|.||.||.||.||..|..|.|||||.||.||
BPUM_2432___o 994 CCCGAATTCCCGCTTTATAATGAAGAGGAACTGTCTGATAACCGCGTGAT 1043
BSNT_04054___ 1044 GTACACGATGGAAAATGAAGAAGTGCCATTTAACATTACACGCGATCCAG 1093
|||||.|.|.||..|.|.|||.|..||||||.|.||.|||.|.|||||.|
BPUM_2432___o 1044 GTACAGGTTTGATGAGGGAGATGCACCATTTGAGATCACAAGAGATCCTG 1093
BSNT_04054___ 1094 ACGGTGTATTTGTGCTTTCAGGAGACAGC-CTTGAGCGGTTATTCAAGAT 1142
|||||..|||||| |.||..||..|.||| ||||||||..|.||.|||||
BPUM_2432___o 1094 ACGGTACATTTGT-CATTACGGGTAAAGCACTTGAGCGACTGTTTAAGAT 1142
BSNT_04054___ 1143 GACTGATTTCTCACGTGATGAATCGGTTAAACGGTTTGCAAGACAGATGC 1192
|||.|||||||||.|.|||||.||.||.|||||.||..|.|||||..|||
BPUM_2432___o 1143 GACAGATTTCTCAAGAGATGAGTCCGTGAAACGATTCTCTAGACAATTGC 1192
BSNT_04054___ 1193 GCGGAATGGGTGTTGATGAAGCACTCAGAGAACGCGGAGC-CAAGGATGG 1241
|||||||||||||.|||||.||..|..|.||.||.||.|| ||| |||||
BPUM_2432___o 1193 GCGGAATGGGTGTCGATGATGCCTTGCGTGAGCGTGGTGCACAA-GATGG 1241
BSNT_04054___ 1242 AGATATAATCAGGCTTCTGGAATTTGAATTTGAATTTATTGATTAA 1287
.||.||.||..|.||.||.|||||||||||||||||||||||||.|
BPUM_2432___o 1242 CGACATCATTCGTCTGCTTGAATTTGAATTTGAATTTATTGATTGA 1287
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