Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04053 and BPUM_2431
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:33
# Commandline: needle
# -asequence dna-align/BSNT_04053___pheB.1.24716.seq
# -bsequence dna-align/BPUM_2431___pheB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04053___pheB-BPUM_2431___pheB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04053___pheB-BPUM_2431___pheB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04053___pheB
# 2: BPUM_2431___pheB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 446
# Identity: 336/446 (75.3%)
# Similarity: 336/446 (75.3%)
# Gaps: 4/446 ( 0.9%)
# Score: 1235.0
#
#
#=======================================
BSNT_04053___ 1 ATGAAAGAGGAGACATTTTATCTTGTCCGTGAAGATGTATTGCCCGATGC 50
.|||||||.||.||.||.|||.|.||..|.||.|||||..|.||.|||||
BPUM_2431___p 1 GTGAAAGAAGAAACGTTCTATTTAGTAAGAGAGGATGTCCTTCCAGATGC 50
BSNT_04053___ 51 AATGAGAAAAACATTAGAAGTCAAAAAGCTGCTTGATCGAAAAAAAGCAG 100
.|||.|||||||..|.||||||||||||||.||.|||||.||||||||.|
BPUM_2431___p 51 GATGCGAAAAACGCTTGAAGTCAAAAAGCTTCTCGATCGCAAAAAAGCGG 100
BSNT_04053___ 101 ATTCAGTAGCAGATGCCGTTCAAAAGGTCGATTTAAGCAGAAGTGCGTTT 150
|||||||.||.|||||.||||||.|.|..|||||||||.|.|||||.|||
BPUM_2431___p 101 ATTCAGTTGCCGATGCTGTTCAACAAGCGGATTTAAGCCGCAGTGCTTTT 150
BSNT_04053___ 151 TATAAATACAGGGATGCTGTTTTTCCATTCTACACCATGGTAAAAGAACA 200
|||||||||||.|||||||||||||||||.||.||.|||||.|||||.||
BPUM_2431___p 151 TATAAATACAGAGATGCTGTTTTTCCATTTTATACGATGGTGAAAGAGCA 200
BSNT_04053___ 201 AATTATCACACTTTTCTTTCATTTGGAGGATAGGTCAGGTGCGTTATCTC 250
.||.||||||.|.||.||.||..|.||||||.||||.||.|| |.|.||
BPUM_2431___p 201 GATCATCACATTGTTTTTCCACCTTGAGGATCGGTCTGGGGC--TCTGTC 248
BSNT_04053___ 251 A--GCTTCTTCAGGCGGTAGCTGATTCTGGAAGCAACGTTCTTTCCATTC 298
| .||.|||||....||.|||||.|||||..|.||.||..|.|||||||
BPUM_2431___p 249 AAGACTACTTCAAATTGTGGCTGACTCTGGCTGTAATGTGTTATCCATTC 298
BSNT_04053___ 299 ACCAGACCATTCCGCTTCAAGGCAGAGCAAATGTGACACTGTCTATCAGT 348
||||.||.||||||||.||.||.|||||.|||||.||.||.||.||.||.
BPUM_2431___p 299 ACCAAACGATTCCGCTGCAGGGAAGAGCGAATGTCACCCTATCCATTAGC 348
BSNT_04053___ 349 ACGTCGGCAATGGAAGAAGACATTCATACATTAATGAATAAGCTCAGGAA 398
|||.|.|.|||||.|||.||.||..|||||.|.||||||.|..|.||.||
BPUM_2431___p 349 ACGGCTGGAATGGCAGATGATATCAATACAGTCATGAATCAATTAAGAAA 398
BSNT_04053___ 399 GTTTGATTTTGTAGAAAAGGTTGAAATATTAGGTTCAGGTGCATAA 444
..||||.|||||.|||||.||||||||..|||||||.||.||.|||
BPUM_2431___p 399 ACTTGAATTTGTCGAAAAAGTTGAAATTCTAGGTTCTGGGGCGTAA 444
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