Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04032 and BPUM_2418
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:32
# Commandline: needle
# -asequence dna-align/BSNT_04032.1.24716.seq
# -bsequence dna-align/BPUM_2418___yrzF.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04032-BPUM_2418___yrzF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04032-BPUM_2418___yrzF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04032
# 2: BPUM_2418___yrzF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 712
# Identity: 428/712 (60.1%)
# Similarity: 428/712 (60.1%)
# Gaps: 131/712 (18.4%)
# Score: 1140.5
#
#
#=======================================
BSNT_04032 1 ATG-CTGA---CAAAAGCAGAGGCACTGGCCCATTCCG--TCA-TATACC 43
||| |.|| |||||| |.|.|||.|.| || ||| |||
BPUM_2418___y 1 ATGTCAGAAGTCAAAAG-------ATTAGCCGAAT-CGATTCAGTAT--- 39
BSNT_04032 44 GCAAGAACAGCAGATTTGATAAA----GTCAAAGAG---------AAATC 80
||.|| .|||||| .|||.| || ||| |
BPUM_2418___y 40 -CATGA----------GGATAAACGTCTTCATA-AGCTTGCCTTTAAA-C 76
BSNT_04032 81 CG--AGGAATTAACACTAATCGGCAAGGGAAGAAGCGCCTATGTGTTTGC 128
|| ||...||.| .||...||||||.||||||||.||||||||.|||.|
BPUM_2418___y 77 CGGCAGAGCTTGA-GCTGTGCGGCAAAGGAAGAAGTGCCTATGTCTTTTC 125
BSNT_04032 129 CTTAACAGAAGGCGGTCGA-AAAATGGCGCTGAAAGTATTTTTTCCGGAA 177
.|..|.|.|||.||| |.| |||||||||||.|||||.|||||.||....
BPUM_2418___y 126 ATACAAAAAAGACGG-CAAGAAAATGGCGCTAAAAGTCTTTTTCCCTTCT 174
BSNT_04032 178 TATCGA------GCGACAGCAGTCAAAGAAGCAGCGATCTATGAAAAATT 221
||||.| || |.|| ||||||||.||.||.|||||||||.|
BPUM_2418___y 175 TATCAACATATTGC-----CCGT-AAAGAAGCCGCCATTTATGAAAAACT 218
BSNT_04032 222 AGCCGGGTCCGCATTCTATCCTGACATTTACGAAACTGGCGATTCA-TTT 270
..|.||.||..|.|.|||.|||||.|||||.|||.||||.|| ||| |.|
BPUM_2418___y 219 CTCTGGTTCGTCTTACTACCCTGAGATTTATGAATCTGGGGA-TCAGTAT 267
BSNT_04032 271 ATTCTCATGGAATATATTAAAGGTGAAACCTTTTATAACTGTCTGAAGAA 320
|||.|.|||||||||||||||||..|.||.||||||.|.||.||.|..||
BPUM_2418___y 268 ATTTTAATGGAATATATTAAAGGAAATACTTTTTATGAATGCCTCACAAA 317
BSNT_04032 321 AGGCATTGCAATCAGTGATGACATGATTCAGCAGGTTGAAGAAGCGCTTT 370
.||.|||.|.||.|...|..|.||||||.|.||.||.||.||.|||||..
BPUM_2418___y 318 GGGGATTCCTATTAAAAAACAAATGATTGAACAAGTCGATGATGCGCTAG 367
BSNT_04032 371 CTGACGCCCGGGCAG-CCGGACTGAACCCGTCAGATATTCATTTGCGAAA 419
..||.||.||.| || ..||..|||||||.||.||.||.||..||||.||
BPUM_2418___y 368 AAGAAGCACGCG-AGAAAGGGTTGAACCCTTCTGACATCCACCTGCGGAA 416
BSNT_04032 420 TCTGATATTGACA---GAAACCGGGGC-GGTGCGGGTGATTGATGTTGCG 465
||||||.||.||| ||| ||.| |||..||||.||.||.|||||.
BPUM_2418___y 417 TCTGATCTTAACAAAGGAA----GGACAGGTCAGGGTCATCGACGTTGCC 462
BSNT_04032 466 AGATTTGA-GCAAACAAAAACATGCACGCAGTGGGACGACTTAAAATCCG 514
.| |||.| .|||||||||.|||||...||.|||||.|||||||||.|||
BPUM_2418___y 463 CG-TTTCACACAAACAAAAGCATGCCATCAATGGGATGACTTAAAAGCCG 511
BSNT_04032 515 CATA---TCATGCACTCTACAAAAAACCGATATTCCCCAAAAAGATTCCG 561
|.|| |.|| ||..||||.||..|.||.||.|||||....||.
BPUM_2418___y 512 CTTACGCTTAT------TATCAAAAGCCTTTTTTTCCGAAAAAAGCACCA 555
BSNT_04032 562 GGTTTTTGGCTGGAGATCATCGCATTTTTATATAAGAAAGA--------- 602
.||.|.|||||.||..|.||.||.|.|||.||||| |||||
BPUM_2418___y 556 CGTCTATGGCTTGAAGTGATTGCTTATTTCTATAA-AAAGAACTGGCTGT 604
BSNT_04032 603 ---TTGGT----TTCAAAAGC------ATTTC---GCACAGCGGAAAAGA 636
.|||| ||.|.||.| ||||| |||.|.
BPUM_2418___y 605 CCCGTGGTCAGCTTAATAATCGGAATGATTTCTCTGCATAA--------- 645
BSNT_04032 637 AAATATTCTTAA 648
BPUM_2418___y 645 ------------ 645
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