Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04021 and BPUM_2414
See
Amino acid alignment /
Visit
BSNT_04021 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:32
# Commandline: needle
# -asequence dna-align/BSNT_04021.1.24716.seq
# -bsequence dna-align/BPUM_2414.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04021-BPUM_2414.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04021-BPUM_2414.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04021
# 2: BPUM_2414
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 209
# Identity: 145/209 (69.4%)
# Similarity: 145/209 (69.4%)
# Gaps: 16/209 ( 7.7%)
# Score: 477.5
#
#
#=======================================
BSNT_04021 1 ATGACTGAATTTCCTAAGATCATT-ATGATTCTTGGTGCTG----TTTTG 45
.||||||||||.|||||.|| ||| ||||||.|.||||.|| |||||
BPUM_2414 1 GTGACTGAATTCCCTAAAAT-ATTGATGATTTTAGGTGGTGTCCTTTTTG 49
BSNT_04021 46 CTTATTATCGGAG---CAGTTTTGCATTTTGTCGGCAAGATGCCGGGAGA 92
| ||.|| .|||.||.||.||.||.||.|||.|.||.||.||
BPUM_2414 50 C-------CGCAGGGTTAGTATTTCAATTGGTTGGTAAGCTTCCAGGTGA 92
BSNT_04021 93 TATTTTTGTAAAAAAAGGAAATGTCACGTTTTTCTTCCCGGTTGTCACTT 142
|||||||||.||||||||||||||.||.||.||.||.||.||..||||.|
BPUM_2414 93 TATTTTTGTGAAAAAAGGAAATGTGACCTTCTTTTTTCCTGTGATCACCT 142
BSNT_04021 143 GTATTATTATAAGTGTGGTATTATCAATTTTGCTTAATCTTTTTGGCAGA 192
|.|||.|.||.||..|.||..|..|.||.||.||.|||.|.|||||..|.
BPUM_2414 143 GCATTGTCATTAGCATCGTGCTCACGATATTACTGAATATCTTTGGACGG 192
BSNT_04021 193 ATGAAATAA 201
|||||||||
BPUM_2414 193 ATGAAATAA 201
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.