Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04017 and BPUM_2410

See Amino acid alignment / Visit BSNT_04017 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:32
# Commandline: needle
#    -asequence dna-align/BSNT_04017.1.24716.seq
#    -bsequence dna-align/BPUM_2410___yrzE.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04017-BPUM_2410___yrzE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04017-BPUM_2410___yrzE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04017
# 2: BPUM_2410___yrzE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 410
# Identity:     265/410 (64.6%)
# Similarity:   265/410 (64.6%)
# Gaps:          52/410 (12.7%)
# Score: 832.0
# 
#
#=======================================

BSNT_04017         1 ATGGAGGAAACGAAACAAGTTGGAAAAGGCATTCTTTACGGCTTAATCGC     50
                     |||.||||||||||||||.|.||||||||.|||.|.|.|||||||||.||
BPUM_2410___y      1 ATGCAGGAAACGAAACAAATCGGAAAAGGGATTTTATCCGGCTTAATGGC     50

BSNT_04017        51 CATATTT-TCAGCCATGCTCCTGACAAGTTTGGCGGTTTCACTTTTATTG     99
                     .||.||| || |.||||.|..|.|||||.||         ||||.|||  
BPUM_2410___y     51 GATTTTTATC-GTCATGATTGTCACAAGCTT---------ACTTGTAT--     88

BSNT_04017       100 ACCGC--------AACCTCGC-----TGGAAGAATCATCATTTAACTGGC    136
                       |||        |.|.||.|     ||.|.|||.||||.|||||.|||.
BPUM_2410___y     89 --CGCTTATGCTTACCTTCACAAGTATGCAGGAAGCATCGTTTAAATGGA    136

BSNT_04017       137 TGATCACAGCTATCTCATTTCT--CTCTTTATTTATCGGCGGGTTCATTT    184
                     ||||.|....|.|.||.|||.|  |.||||..|||  ||||||.||||||
BPUM_2410___y    137 TGATTATGATTTTGTCCTTTGTGGCACTTTTATTA--GGCGGGATCATTT    184

BSNT_04017       185 CAGGCGGGAAAGGCAAGGAAAGAGGCTGGATGATTGGAGCATTGACTGCC    234
                     |.||.||.||||..|||||..|.||||||.|.|||||.||..|.|||.|.
BPUM_2410___y    185 CTGGAGGAAAAGCAAAGGAGCGCGGCTGGCTCATTGGTGCGATCACTTCG    234

BSNT_04017       235 ATAAGTTTTTCTCTGATTATCTTATTGTTTCAGTATTTAGGATTCGGAAA    284
                     .|.|..||||||.|.|.|.|.||.||||||||.||||||||.||.|||.|
BPUM_2410___y    235 CTGACCTTTTCTGTCACTGTATTCTTGTTTCAATATTTAGGGTTTGGAGA    284

BSNT_04017       285 GACATTTACAGCAGAACAGCTGATCTTCCATCTGGGATTTTTAGGGGTGT    334
                     .||.|||.||.||||.|||.|.||||..|||..||.|||||||||..|.|
BPUM_2410___y    285 AACTTTTTCACCAGAGCAGTTCATCTATCATGGGGCATTTTTAGGCATTT    334

BSNT_04017       335 GCATGCTGGGCGGGATTTTCGGCGTGAACATGAGGGGAAACAGGTCTTC-    383
                     |.|||.|.|||||.||..|.|||||.||                ||||| 
BPUM_2410___y    335 GTATGTTCGGCGGAATGATTGGCGTCAA----------------TCTTCG    368

BSNT_04017       384 ---CACATAA    390
                        ||.||||
BPUM_2410___y    369 AGGCAAATAA    378


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