Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04017 and BPUM_2410
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:32
# Commandline: needle
# -asequence dna-align/BSNT_04017.1.24716.seq
# -bsequence dna-align/BPUM_2410___yrzE.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04017-BPUM_2410___yrzE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04017-BPUM_2410___yrzE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04017
# 2: BPUM_2410___yrzE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 410
# Identity: 265/410 (64.6%)
# Similarity: 265/410 (64.6%)
# Gaps: 52/410 (12.7%)
# Score: 832.0
#
#
#=======================================
BSNT_04017 1 ATGGAGGAAACGAAACAAGTTGGAAAAGGCATTCTTTACGGCTTAATCGC 50
|||.||||||||||||||.|.||||||||.|||.|.|.|||||||||.||
BPUM_2410___y 1 ATGCAGGAAACGAAACAAATCGGAAAAGGGATTTTATCCGGCTTAATGGC 50
BSNT_04017 51 CATATTT-TCAGCCATGCTCCTGACAAGTTTGGCGGTTTCACTTTTATTG 99
.||.||| || |.||||.|..|.|||||.|| ||||.|||
BPUM_2410___y 51 GATTTTTATC-GTCATGATTGTCACAAGCTT---------ACTTGTAT-- 88
BSNT_04017 100 ACCGC--------AACCTCGC-----TGGAAGAATCATCATTTAACTGGC 136
||| |.|.||.| ||.|.|||.||||.|||||.|||.
BPUM_2410___y 89 --CGCTTATGCTTACCTTCACAAGTATGCAGGAAGCATCGTTTAAATGGA 136
BSNT_04017 137 TGATCACAGCTATCTCATTTCT--CTCTTTATTTATCGGCGGGTTCATTT 184
||||.|....|.|.||.|||.| |.||||..||| ||||||.||||||
BPUM_2410___y 137 TGATTATGATTTTGTCCTTTGTGGCACTTTTATTA--GGCGGGATCATTT 184
BSNT_04017 185 CAGGCGGGAAAGGCAAGGAAAGAGGCTGGATGATTGGAGCATTGACTGCC 234
|.||.||.||||..|||||..|.||||||.|.|||||.||..|.|||.|.
BPUM_2410___y 185 CTGGAGGAAAAGCAAAGGAGCGCGGCTGGCTCATTGGTGCGATCACTTCG 234
BSNT_04017 235 ATAAGTTTTTCTCTGATTATCTTATTGTTTCAGTATTTAGGATTCGGAAA 284
.|.|..||||||.|.|.|.|.||.||||||||.||||||||.||.|||.|
BPUM_2410___y 235 CTGACCTTTTCTGTCACTGTATTCTTGTTTCAATATTTAGGGTTTGGAGA 284
BSNT_04017 285 GACATTTACAGCAGAACAGCTGATCTTCCATCTGGGATTTTTAGGGGTGT 334
.||.|||.||.||||.|||.|.||||..|||..||.|||||||||..|.|
BPUM_2410___y 285 AACTTTTTCACCAGAGCAGTTCATCTATCATGGGGCATTTTTAGGCATTT 334
BSNT_04017 335 GCATGCTGGGCGGGATTTTCGGCGTGAACATGAGGGGAAACAGGTCTTC- 383
|.|||.|.|||||.||..|.|||||.|| |||||
BPUM_2410___y 335 GTATGTTCGGCGGAATGATTGGCGTCAA----------------TCTTCG 368
BSNT_04017 384 ---CACATAA 390
||.||||
BPUM_2410___y 369 AGGCAAATAA 378
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