Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04015 and BPUM_2409
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:31
# Commandline: needle
# -asequence dna-align/BSNT_04015___yrbG.1.24716.seq
# -bsequence dna-align/BPUM_2409___yrbG.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04015___yrbG-BPUM_2409___yrbG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04015___yrbG-BPUM_2409___yrbG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04015___yrbG
# 2: BPUM_2409___yrbG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 703
# Identity: 442/703 (62.9%)
# Similarity: 442/703 (62.9%)
# Gaps: 86/703 (12.2%)
# Score: 1246.0
#
#
#=======================================
BSNT_04015___ 1 ATGGAAGA------GCTTCTCACTATTGCGTTTCGCACAGTCGTATTGTA 44
|||.|.|| |.||.||.||| |..|.|||.||.|.||.||
BPUM_2409___y 1 ATGCAGGAAATCTTGATTATCTCTA------TGAGAACAATCATTTTATA 44
BSNT_04015___ 45 TTTTGTGATATTGG-TCATTTTTCGTTTCATGGGCAAACGGGAGATCGGA 93
||||.|.|| |||| |.||||||||..|.|||||||||.|.|||||.|||
BPUM_2409___y 45 TTTTCTTAT-TTGGTTTATTTTTCGGCTAATGGGCAAAAGAGAGATTGGA 93
BSNT_04015___ 94 GAGCTTAGTATTTTAGATCTCGTTGTCTTTATCATGATGGCTGAAATTGC 143
||..|.||.|||||||||||.||..|.|||||.|||||.||.||||||||
BPUM_2409___y 94 GAATTAAGCATTTTAGATCTTGTCATTTTTATGATGATCGCAGAAATTGC 143
BSNT_04015___ 144 CGTTTTAGCCATAGAAAACGTAGACGATCATCTATTTCATACCATTTTGC 193
.|||.|.||.||||||.|.||.||.||||||.|.||.|||||..|.|.||
BPUM_2409___y 144 AGTTCTCGCTATAGAAGAAGTCGAGGATCATATGTTACATACGGTATGGC 193
BSNT_04015___ 194 CAATGCTTGTATTAATGATCATTCAAGTGACTTTGGCATACTTTTCTTTA 243
|.||.||..|.||||...|||||||..|.||..|.||.|||.|.||.||.
BPUM_2409___y 194 CGATTCTGCTGTTAACCTTCATTCAGATTACACTTGCCTACCTCTCATTG 243
BSNT_04015___ 244 AAAAACCGAAAAGTCCGCCAGCTTCTTGACGGTAAGCCGACCATAATTAT 293
|||..||.|...|||||.|...|||||||.||.||.|||..|.||.|.||
BPUM_2409___y 244 AAATTCCAAGGTGTCCGGCGTTTTCTTGATGGCAAACCGGTCCTACTCAT 293
BSNT_04015___ 294 CAAATATGGAAAAATTGACGAAGAAGCCATGAAATCACAGCGATATAATT 343
||...||||.|||||||||||||..||.||||.|..|||||||||.||||
BPUM_2409___y 294 CATCAATGGGAAAATTGACGAAGGTGCGATGAGAAAACAGCGATACAATT 343
BSNT_04015___ 344 TTGATGATTTAATGGTTCAACTCAGAGAAAATAGCGTCGACAGAGTAGC- 392
||||||||.|..|..||||..|.||||||||.|.|.|||| ||||
BPUM_2409___y 344 TTGATGATCTGCTCATTCAGTTAAGAGAAAACAACATCGA-----TAGCA 388
BSNT_04015___ 393 ----TGACGTATCATTTGCCATATTAGAGCCGTCGGGCAAACTGACTATT 438
.||.||.||.|..|||||.|||||.||.||.||.||.||..|..||
BPUM_2409___y 389 TTCAGGATGTCTCTTACGCCATTTTAGAACCATCTGGAAAGCTCGCCGTT 438
BSNT_04015___ 439 GTAAAGAAAGAAAA-TAGCGGAGAGCATCG-GCAGCTCGAAATGCCGCTC 486
||..|.|||||||| .|||..|.| |||.| || |||.||..||||.||.
BPUM_2409___y 439 GTTGAAAAAGAAAACAAGCACACA-CATGGAGC-GCTTGAGTTGCCACTT 486
BSNT_04015___ 487 ATTATAGACGGCTTCATTCAAACA-GAAAACCTGTCCAG--AATCAGTAA 533
|||..|||.||..|..|.| |.|| ||..||||| .|| |||.|.|.|
BPUM_2409___y 487 ATTGCAGATGGGGTTGTGC-AGCATGATCACCTG--AAGCAAATTAATCA 533
BSNT_04015___ 534 AGATAAAAAATGGCTGCTTGAAAG-TTTGCAAA--AACACG--------- 571
|.||.||.||||| ||||||| |..||.|| ||.|.|
BPUM_2409___y 534 AAATGAACAATGG----TTGAAAGATGAGCTAACCAAAAGGGGCTATCAT 579
BSNT_04015___ 572 GATACACAAACCCTTCAGATATTTCATTTTGCTCGTTTA--CAGACGGAG 619
||||.|.| .||| |||||||..|||...|||| ||.| ||
BPUM_2409___y 580 GATATAGA------GCAG--ATTTCATACTGCAGCTTTAATCAAA---AG 618
BSNT_04015___ 620 A-ATTATTTATTGACGAAAAAGATGGGTACCGCACGTGA----------- 657
| |||.|.||||||....||||||| |.|||.
BPUM_2409___y 619 ACATTTTATATTGATTTGAAAGATG--------AAGTGGTCAAAAAAAGA 660
BSNT_04015___ 657 --- 657
BPUM_2409___y 661 TGA 663
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