Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04013 and BPUM_2407
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:31
# Commandline: needle
# -asequence dna-align/BSNT_04013___yrzD.1.24716.seq
# -bsequence dna-align/BPUM_2407___yrzD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04013___yrzD-BPUM_2407___yrzD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04013___yrzD-BPUM_2407___yrzD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04013___yrzD
# 2: BPUM_2407___yrzD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 314
# Identity: 223/314 (71.0%)
# Similarity: 223/314 (71.0%)
# Gaps: 34/314 (10.8%)
# Score: 747.0
#
#
#=======================================
BSNT_04013___ 1 GTGGAGA-AGCATCCAGCCGATCTATATAAAGACCACGTCAGGCCGTTTC 49
|.||.| |.|||||.||.|...|.||.||||||||..|.|.|||.||||
BPUM_2407___y 1 -TTGACACAACATCCGGCTGCAATTTACAAAGACCATTTAAAGCCTTTTC 49
BSNT_04013___ 50 TTTACAGCAAACTGGAAGAGTTTAAGATTCTCGGGTATGATGATGTTGAA 99
|.|.|||.||.||.|||||.||.|...||.|.||.|||.|.|||||.||.
BPUM_2407___y 50 TGTTCAGTAAGCTTGAAGAATTCATCGTTTTGGGCTATAAAGATGTAGAT 99
BSNT_04013___ 100 CTCGA--AAGTTTGTGGTCATACTTAACAG-ATAAGAAGTGGAAAAAGAA 146
.|.|| || ||.||||||||||| |.|| |||||||.|||||.|| ||
BPUM_2407___y 100 TTAGAGGAA--TTATGGTCATACTT-AGAGAATAAGAAATGGAAGAA-AA 145
BSNT_04013___ 147 AACGGAACTGAG-----CATTTATGAACTGGCGAGT----GATATTTTAT 187
||| || ||| .|||.|||||.|| || ||||||||||
BPUM_2407___y 146 AAC--AA--GAGTATCCGATTCATGAAATG----GTTGCAGATATTTTAT 187
BSNT_04013___ 188 CAGTGAAAATTGGCGAATTTATGAACTATGCAACCGTTGAGTCATTTAAA 237
|.||||||||||||||||||||||||||||||||||||.||||.||||||
BPUM_2407___y 188 CTGTGAAAATTGGCGAATTTATGAACTATGCAACCGTTCAGTCGTTTAAA 237
BSNT_04013___ 238 ACGTCTAATTGGCTGGGCAGTGAAGAGGGCCAGGAAGCAT----TGGAAG 283
||||||..||...|||.|||||||||.||| |||.|| |.||.|
BPUM_2407___y 238 ACGTCTGCTTTTTTGGACAGTGAAGATGGC----AAGAATATGCTAGATG 283
BSNT_04013___ 284 AACTGCTGAGATAG 297
|||||.|||.|||.
BPUM_2407___y 284 AACTGTTGAAATAA 297
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