Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03994 and BPUM_2393
See
Amino acid alignment /
Visit
BSNT_03994 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:29
# Commandline: needle
# -asequence dna-align/BSNT_03994.1.24716.seq
# -bsequence dna-align/BPUM_2393___yrzC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03994-BPUM_2393___yrzC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03994-BPUM_2393___yrzC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03994
# 2: BPUM_2393___yrzC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 426
# Identity: 324/426 (76.1%)
# Similarity: 324/426 (76.1%)
# Gaps: 12/426 ( 2.8%)
# Score: 1198.5
#
#
#=======================================
BSNT_03994 1 ATGTTGAAAATATCAACTAAGGGAAGATACGGGCTCACCATTATGATCGA 50
||||||||.||||||||.||.|||||.||.||.||.||.||||||||
BPUM_2393___y 1 ---TTGAAAATTTCAACTAAAGGCAGATATGGTCTAACGATCATGATCGA 47
BSNT_03994 51 GCTTGCAAAAAAGCACGGTGAAGGCCCGACTTCATTAAAAAGCATCGCAC 100
..|.||.|||||.||.||.||||||||.||.|||||||||...|||||.|
BPUM_2393___y 48 ATTAGCCAAAAAACATGGCGAAGGCCCTACATCATTAAAATCAATCGCTC 97
BSNT_03994 101 AGACGAATAATTTGTCCGAGCATTATTTGGAGCAGCTGGTATCGCCGCTC 150
|.|..|||||||||||.|||||||||||.||||||||.|||||.||.||.
BPUM_2393___y 98 AAAACAATAATTTGTCTGAGCATTATTTAGAGCAGCTTGTATCACCACTT 147
BSNT_03994 151 AGAAATGCCGGTTTAGTGAAAAGCATCAGAGGCGCATATGGCGGATATG- 199
.|.||||||.||.|.||||||||.||..|.||.|||||||||||.||||
BPUM_2393___y 148 CGGAATGCCCGTCTTGTGAAAAGTATTCGCGGTGCATATGGCGGCTATGT 197
BSNT_03994 200 TATTAGGCA-GTGAGCCGGATGCCATTACCGCGGGAGATATTATCCGTGT 248
|.|| ||| .|||.|||.|.|..||.||.||.||.||||||||.|||||
BPUM_2393___y 198 TCTT--GCACATGAACCGAACGAGATCACAGCCGGTGATATTATTCGTGT 245
BSNT_03994 249 GCTTGAGGGGCCGATCAGCCCTGTTGAAGTGCTGGAAGATGAGGAGCCTG 298
..|.||.||.|||||.||.|||||.|||||..|.|||.|.||.||.||.|
BPUM_2393___y 246 ATTAGAAGGACCGATTAGTCCTGTCGAAGTTATTGAAAACGAAGAACCAG 295
BSNT_03994 299 CCAAGCGTGAGCTCTGGATTCGCATCCGGGATGCTGTAAAAGAGGTTTTA 348
|.||||||||.||.||||||||.||.||.|||||.||||||||.||..||
BPUM_2393___y 296 CAAAGCGTGAACTTTGGATTCGAATTCGTGATGCAGTAAAAGACGTACTA 345
BSNT_03994 349 GACAGTACAACATTAGAGGATCTT-GCCAGCTATACA---GACGGAGAGC 394
||||.||||||..|.||.|| ||| ||.||||||||| ||||||.|.|
BPUM_2393___y 346 GACAATACAACTCTTGAAGA-CTTGGCAAGCTATACAGATGACGGAAATC 394
BSNT_03994 395 AAGAAGCTTATATGTTCTATATTTAG 420
||||.||.|||||||||||.||||||
BPUM_2393___y 395 AAGACGCGTATATGTTCTACATTTAG 420
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.