Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03987 and BPUM_2387
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:28
# Commandline: needle
# -asequence dna-align/BSNT_03987.1.24716.seq
# -bsequence dna-align/BPUM_2387.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03987-BPUM_2387.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03987-BPUM_2387.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03987
# 2: BPUM_2387
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 196
# Identity: 155/196 (79.1%)
# Similarity: 155/196 (79.1%)
# Gaps: 8/196 ( 4.1%)
# Score: 620.0
#
#
#=======================================
BSNT_03987 1 ATGCTTATATGCCCGAATTGCAAAAGTAAGGATATCGGCAAAATCGGCGT 50
|||||.||.|||||.|||||||||.||||.||.|||||.|||||.||.||
BPUM_2387 1 ATGCTCATTTGCCCAAATTGCAAATGTAAAGACATCGGAAAAATTGGGGT 50
BSNT_03987 51 GAACCAATATTATTGTTGGGGCTGTTTTATTGAACTGACAGTGGCGAAAG 100
.||.|||||||||||.||||||||||||||||||.|||||.||.|.||||
BPUM_2387 51 CAATCAATATTATTGCTGGGGCTGTTTTATTGAATTGACACTGTCAAAAG 100
BSNT_03987 101 GGAAGATTGCAACTCATCAGGTGGAAGAAGACGGAACGTTAAGCAGCTTG 150
|.||.||..|.||.||.||.|||||||||||||||||..||||||||||.
BPUM_2387 101 GTAAAATATCTACACACCAAGTGGAAGAAGACGGAACACTAAGCAGCTTA 150
BSNT_03987 151 GATGATTTGTTTTCTGAGGATGAACGCAGCATCAATT----TTTAA 192
||||||.|||||..|||.|||||||| .|||||| |.|||
BPUM_2387 151 GATGATCTGTTTAGTGATGATGAACG----TTCAATTCAACTATAA 192
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