Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03984 and BPUM_2384
See
Amino acid alignment /
Visit
BSNT_03984 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:28
# Commandline: needle
# -asequence dna-align/BSNT_03984___glnM.1.24716.seq
# -bsequence dna-align/BPUM_2384___glnM.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03984___glnM-BPUM_2384___glnM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03984___glnM-BPUM_2384___glnM.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03984___glnM
# 2: BPUM_2384___glnM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 692
# Identity: 445/692 (64.3%)
# Similarity: 445/692 (64.3%)
# Gaps: 79/692 (11.4%)
# Score: 1250.0
#
#
#=======================================
BSNT_03984___ 1 ATGAATG-------TGTCAATTCTTTTCGATAACTTCGGCATGTATATG- 42
.|| |.||.|||||....||.|||||| .||.|.||||
BPUM_2384___g 1 ----TTGCTGCGGTTTTCCATTCTCACTGAAAACTTC--AATCTTTATGT 44
BSNT_03984___ 43 -GACGGTTTTTACCATAC-CTTGCTTGCAAGTGTTATCGCGCTGGCCGGC 90
||.||.|||.|..|||| .||| .|||||||||.||.||..||...||.
BPUM_2384___g 45 AGAAGGGTTTAAATATACAATTG-GTGCAAGTGTCATTGCTTTGATTGGA 93
BSNT_03984___ 91 AGTTTTGTCCTCGGCGTTAC---TGTAGCGGTTATGAGAAT---AACAGT 134
||.|||.|..|||| ||| ..|.||..|||||||||| ..||.|
BPUM_2384___g 94 AGCTTTTTAATCGG---TACACTCATTGCCATTATGAGAATTGCGCCACT 140
BSNT_03984___ 135 CTTTAAGCCGCTGCAA-TGGCTCGGGACCGTATATGTAGAATTCATCCGC 183
| |.|||.|| ||| |||.|.|||||.|..||.|||||||||||.||.
BPUM_2384___g 141 C---AGGCCACT-CAACTGGTTAGGGACGGCTTACGTAGAATTCATTCGG 186
BSNT_03984___ 184 AACATCCCTCTTCTT-TTAATTACCTTTGTTTTCTATTTCGGACTTCCAA 232
||.||.|| .||.|| ||.|||||.|||||.||||..||.|||.|.||
BPUM_2384___g 187 AATATTCC-GTTATTATTGATTACATTTGTCTTCTTCTTTGGATTACC-- 233
BSNT_03984___ 233 ACGCAGGCCTGAGGCTT------------GACGGTTTTCA-AGCGGGAAC 269
|..|||| ||.|| .|||| .||.||.||
BPUM_2384___g 234 ----------GGTGCTTGGTATTGTAGCAGATGG-CTTCACCGCCGGCAC 272
BSNT_03984___ 270 GGTTGCTCTCACCATTTATACCTCTGCGTTTATCGCTGAAGCCATCAGAG 319
..||||.||..|||||||||||||.||.|||||.|||||||||.|..|.|
BPUM_2384___g 273 AATTGCCCTTGCCATTTATACCTCAGCCTTTATTGCTGAAGCCGTTCGCG 322
BSNT_03984___ 320 CAGGAATCCAGTCTGT-----TTCAAAAGGGCAGATGGAAGCGGCACGCT 364
||||.||.||..|||| || ||.||.||||||||.||.||..
BPUM_2384___g 323 CAGGGATACAAGCTGTACCGCTT-----GGACAAATGGAAGCCGCCCGTG 367
BSNT_03984___ 365 CGTCAGGCTTTA-CCTACAGCCAAGCCATGCTCCATATCATTTTGCCGCA 413
|.||||| |.|| ||||..||....|.||||...||||||||.|||||||
BPUM_2384___g 368 CTTCAGG-TCTATCCTATGGCGGGACGATGCGGTATATCATTCTGCCGCA 416
BSNT_03984___ 414 GGCAATCAAAATCGTCATGCCGCCTTTAGGCAATCAATTT-TTAAACTTA 462
.||.||.|||||.|||||.||.|||.|.||.||||||||| ||||.|||
BPUM_2384___g 417 AGCGATTAAAATTGTCATTCCCCCTCTTGGGAATCAATTTATTAACCTT- 465
BSNT_03984___ 463 GTCAAAAACTCTTCGATTCTTGGGGTTGTGGCCGGATTGGATCTTATGTA 512
||.||||||||.||.|||.|.||.||..|.||.||.||.|||||.|||||
BPUM_2384___g 466 GTTAAAAACTCATCTATTTTAGGTGTCATCGCAGGGTTTGATCTCATGTA 515
BSNT_03984___ 513 CCAGGCTGA-TTTAGTCTCGTCGAGCACACTCGTTGTATTTGATGTTTAT 561
.||.|..|| .||| ||.|.||.||.|||.|.||...|||||||||.||.
BPUM_2384___g 516 TCAAGGAGACCTTA-TCGCTTCTAGAACATTTGTGACATTTGATGTCTAC 564
BSNT_03984___ 562 ATTTTCGTGGCGCTTTTTTA-CTTAGTGCTGACGATTCCGCTTAGCATCG 610
|||||.||.||..|.||.|| ||.| |..|.|||||||||||.||..|.|
BPUM_2384___g 565 ATTTTTGTTGCCATGTTCTATCTGA-TATTAACGATTCCGCTCAGTTTAG 613
BSNT_03984___ 611 GTGTTAACTATCTGGAAAAACGGCTGGAAAAAAGCTATTGA- 651
|.|||...|||.|.||||||.||.|.|.||.||||.|.| |
BPUM_2384___g 614 GCGTTGGTTATTTAGAAAAAAGGTTAGCAAGAAGCCACT-AG 654
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.