Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03981 and BPUM_2382
See
Amino acid alignment /
Visit
BSNT_03981 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:28
# Commandline: needle
# -asequence dna-align/BSNT_03981___glnQ.1.24716.seq
# -bsequence dna-align/BPUM_2382___glnQ1.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03981___glnQ-BPUM_2382___glnQ1.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03981___glnQ-BPUM_2382___glnQ1.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03981___glnQ
# 2: BPUM_2382___glnQ1
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 757
# Identity: 558/757 (73.7%)
# Similarity: 558/757 (73.7%)
# Gaps: 56/757 ( 7.4%)
# Score: 2028.5
#
#
#=======================================
BSNT_03981___ 1 ATGATCACATTTCAAAATGTAAACAAGCATTACGGAGATTTTCACGTGTT 50
|||||||||||..||||.||.||.||.|||||.||..|.||.||.||..|
BPUM_2382___g 1 ATGATCACATTCGAAAAAGTCAATAAACATTATGGCCAGTTCCATGTACT 50
BSNT_03981___ 51 AAAACAAATTAATCTTCAAATCGAAAAAGGTGAAGTCGTTGTTATCATCG 100
.|||.|.|||||.||.||.||..||||||||||.|||||.||.|||||||
BPUM_2382___g 51 GAAAGACATTAACCTACATATTCAAAAAGGTGAGGTCGTCGTGATCATCG 100
BSNT_03981___ 101 GCCCATCCGGTTCCGGTAAAAGCACATTGCTCAGATGCATCAACAGACTT 150
|.||.||.||.||.||||||||||||.||||||||||||||||..|.|||
BPUM_2382___g 101 GTCCTTCAGGATCAGGTAAAAGCACAATGCTCAGATGCATCAATCGTCTT 150
BSNT_03981___ 151 GAGACGATCAATGAGGG---AGTGCTTACAGTAAACG------------- 184
||.|..||..||||||| .|||||| ||.||||
BPUM_2382___g 151 GAAAGCATTGATGAGGGTAAGGTGCTT---GTCAACGAAGTGCCTGTTCA 197
BSNT_03981___ 185 GCA-CCGCCATTAACGACAGAAAAACTGATATCAATAAAGTGCGGCAAAA 233
||| ||| |||||..||||||||...||..|||||||
BPUM_2382___g 198 GCATCCG--------------AAAACCAATATCAATCTTGTCAGGCAAAA 233
BSNT_03981___ 234 TATCGGGATGGTGTTTCAGCACTTTCATTTATATCCACATAAAACAGTGC 283
||||||||||||.||||||||||||||..|.|||||.|||||.||.||||
BPUM_2382___g 234 TATCGGGATGGTATTTCAGCACTTTCACCTCTATCCGCATAAGACGGTGC 283
BSNT_03981___ 284 TGCAGAACATCATGCTGGCTCC------GGTAAAAGTGCTTAGACAATCA 327
|..|.|||||.|||||.||.|| |||.|||..|.|.||..||
BPUM_2382___g 284 TTGAAAACATTATGCTTGCGCCAATGAAGGTGAAAAAGGTGAGCAAA--- 330
BSNT_03981___ 328 CCTGAACAAGCAAAGGAAACGGCGCG-GTACTATCTTGAAAAAGTCGGCA 376
|||.||||.|.||||||.|| || .|..|||.|..|.||||||||.|
BPUM_2382___g 331 ---GAAGAAGCGAGGGAAACAGC-CGAATTTTATTTACATAAAGTCGGTA 376
BSNT_03981___ 377 TCCCAGACAAGGCTGACGCCTATCCTTCCCAG-CTTTCCGGCGGGCAGCA 425
|.||.||.||.|||.|||||||.|||| |.|| ||.||.|||||.|||||
BPUM_2382___g 377 TTCCTGATAAAGCTAACGCCTACCCTT-CAAGACTATCAGGCGGACAGCA 425
BSNT_03981___ 426 GCAGCGTGTTGCCATCGCAAGAGGACTGGCGATGAAGCCGGAGGTCATGC 475
|||||||||||||||.||.|||||.||.||||||||.||.||||||||||
BPUM_2382___g 426 GCAGCGTGTTGCCATTGCTAGAGGGCTTGCGATGAAACCAGAGGTCATGC 475
BSNT_03981___ 476 TGTTTGACGAGCCGACATCAGCACTTGATCCTGAAATGATCGGTGAGGTG 525
||||.|||||.|||||||||||.|||||.||.||.|||||.||.|||||.
BPUM_2382___g 476 TGTTCGACGAACCGACATCAGCTCTTGACCCAGAGATGATTGGAGAGGTA 525
BSNT_03981___ 526 CTAGATGTCATGAAAACA-CTCGCCAAAGAAGGCATGACAATGGTTGTCG 574
||||||||.||| ||||| ||||||..||||||.|||||.||||||||||
BPUM_2382___g 526 CTAGATGTGATG-AAACAGCTCGCCCGAGAAGGAATGACCATGGTTGTCG 574
BSNT_03981___ 575 TGACACACGAAATGGGGTTTGCCAAAGAAGTTGCCGACCGGATTGTCTTC 624
|.|||||.||.|||||.|||||||.||||||.|||||.||.||||||||.
BPUM_2382___g 575 TCACACATGAGATGGGATTTGCCAGAGAAGTGGCCGATCGTATTGTCTTT 624
BSNT_03981___ 625 ATTGACGAAGGAAAGA-TTTTAGAAGAAGCAATGCCGGCTGAGTTTTACG 673
|||||.||||| .||| ||.|.||||||.|||..|||||||..|||||.|
BPUM_2382___g 625 ATTGATGAAGG-CAGAGTTCTTGAAGAATCAACACCGGCTGCATTTTATG 673
BSNT_03981___ 674 CGAACCCAAAGGAAGAACGGGC-CCGCTTATTCTTAAGCCGTATTTTAAA 722
.|||.||....||..||||.|| |.|| |.||.|||||||||||||||||
BPUM_2382___g 674 AGAAACCGCGTGAGAAACGCGCACAGC-TCTTTTTAAGCCGTATTTTAAA 722
BSNT_03981___ 723 TCATTAA 729
|||.||.
BPUM_2382___g 723 TCACTAG 729
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.