Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03975 and BPUM_2378
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:27
# Commandline: needle
# -asequence dna-align/BSNT_03975___yrrK.1.24716.seq
# -bsequence dna-align/BPUM_2378___yrrK.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03975___yrrK-BPUM_2378___yrrK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03975___yrrK-BPUM_2378___yrrK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03975___yrrK
# 2: BPUM_2378___yrrK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 426
# Identity: 332/426 (77.9%)
# Similarity: 332/426 (77.9%)
# Gaps: 18/426 ( 4.2%)
# Score: 1299.5
#
#
#=======================================
BSNT_03975___ 1 ATGAGAATATTAGGGCTCGATTTAGGAACCAAAACACTCGGTGTTGCTCT 50
||||||||.|||||..|.||||||||.||.|||||.||.||||||||..|
BPUM_2378___y 1 ATGAGAATTTTAGGCTTAGATTTAGGCACGAAAACCCTTGGTGTTGCAAT 50
BSNT_03975___ 51 GAGCGATGAAATGGGCTGGACTGCTCAAGGCATTGAGACCATAAAGATAA 100
.||.|||||||||||||||||.||.||.||.|||||.||.||.||.||..
BPUM_2378___y 51 CAGTGATGAAATGGGCTGGACGGCGCAGGGGATTGAAACAATTAAAATTG 100
BSNT_03975___ 101 ATGAAGCAGAGGGCGATTATGGTTTATCCCGTTTATCTGAACTGAT---- 146
|||||||||..||.||.|..|||.|...|||..|.||||| |||
BPUM_2378___y 101 ATGAAGCAGGCGGAGACTTCGGTCTCAGCCGCCTGTCTGA---GATCGTC 147
BSNT_03975___ 147 ----AAAGGACTATACTATAGATAAAATCGTGCTCGGCTTTCCTAAGAAC 192
|| |||...|..||||||||.||.||.||.|||||.||.||.
BPUM_2378___y 148 TCGCAA-----TATGGAACGGATAAAATTGTACTTGGTTTTCCAAAAAAT 192
BSNT_03975___ 193 ATGAACGGAACAGTCGGCCCAAGAGGCGAAGCCAGCCAAACATTTGCGAA 242
||||||||.||.|||||.||.||||||||||||||||||.||||||||||
BPUM_2378___y 193 ATGAACGGTACGGTCGGTCCTAGAGGCGAAGCCAGCCAATCATTTGCGAA 242
BSNT_03975___ 243 AGTGCTTGAAACAACGTACAATGTTCCTGTTGTGCTGTGGGACGAGCGTC 292
||||.|.||||..|||||||||||||||||||||||.|||||||||||||
BPUM_2378___y 243 AGTGTTAGAAAACACGTACAATGTTCCTGTTGTGCTTTGGGACGAGCGTC 292
BSNT_03975___ 293 TTACCACAATGGCGGCTGAAAAAATGCTGATTGCAGCTGACGTCAGCAGG 342
|..|.||||||||.||.|||||||||||.||..|.||.||.||.|||||.
BPUM_2378___y 293 TGTCGACAATGGCAGCGGAAAAAATGCTCATCTCTGCAGATGTGAGCAGA 342
BSNT_03975___ 343 CAAAAACGAAAAAAAGTCATTGATAAAATGGCGGCTGTTATGATTTTACA 392
|||||.||.|||||||||||||||||||||||||||||||||||..|.||
BPUM_2378___y 343 CAAAAGCGTAAAAAAGTCATTGATAAAATGGCGGCTGTTATGATCCTGCA 392
BSNT_03975___ 393 AGGATATCTT-GACAGCTTAAATTAA 417
|||.|| ||| |||||||||||||||
BPUM_2378___y 393 AGGGTA-CTTAGACAGCTTAAATTAA 417
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