Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03974 and BPUM_2377

See Amino acid alignment / Visit BSNT_03974 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:27
# Commandline: needle
#    -asequence dna-align/BSNT_03974___yrzB.1.24716.seq
#    -bsequence dna-align/BPUM_2377___yrzB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03974___yrzB-BPUM_2377___yrzB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03974___yrzB-BPUM_2377___yrzB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03974___yrzB
# 2: BPUM_2377___yrzB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 291
# Identity:     224/291 (77.0%)
# Similarity:   224/291 (77.0%)
# Gaps:          12/291 ( 4.1%)
# Score: 846.5
# 
#
#=======================================

BSNT_03974___      1 ATGGAACACGGCGAAAAAAATATTACAATTGTTGACGATCAAGGAAATGA     50
                     |||||||||||.|||||..|.||||||||.|||||.|||.|.||||||||
BPUM_2377___y      1 ATGGAACACGGAGAAAAGCAAATTACAATCGTTGATGATAATGGAAATGA     50

BSNT_03974___     51 ACAGCTTTGTGAAGTGCTGTTTACATTTGAAAACGAAGAGTTTGGCAAGT    100
                     |||||||||.|||||.||.|||||.|||||||.|||..|.|||..|||.|
BPUM_2377___y     51 ACAGCTTTGCGAAGTACTATTTACTTTTGAAAGCGACCATTTTAACAAAT    100

BSNT_03974___    101 CTTATG-TCTTGTACTATCCAA--TCGAATCAAAAGATGACGAGGAAGTA    147
                     |.|||| |||| |||||.||||  ||..|.|  ||||..|.||.|||.|.
BPUM_2377___y    101 CATATGTTCTT-TACTACCCAATTTCTGAGC--AAGACAATGAAGAAATT    147

BSNT_03974___    148 GAAATTCTTGCTTCCAGCTTCACGCCAAACGAAGACGGTGAAAACGGTGA    197
                     |||||||.|||.||.||||||||||||||||||.||||||||.|.||.||
BPUM_2377___y    148 GAAATTCATGCATCAAGCTTCACGCCAAACGAAAACGGTGAAGATGGCGA    197

BSNT_03974___    198 GCTATTCCCGATTGAAACTGACGAAGAATGGGATATGATCGAAGAAACAC    247
                     .|||...||.||||||||.||.|||||.|||||.|||||.||||||||..
BPUM_2377___y    198 ACTAGAGCCTATTGAAACGGATGAAGAGTGGGACATGATTGAAGAAACGT    247

BSNT_03974___    248 TAAACACATTCTT------AGCGGACGAAGACGAAGAATAA    282
                     ||||.||.|||||      ||..||.||||||||||||||.
BPUM_2377___y    248 TAAATACGTTCTTAGATCAAGAAGAAGAAGACGAAGAATAG    288


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