Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00615 and BPUM_2333
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:24
# Commandline: needle
# -asequence dna-align/BSNT_00615___hxlA.1.24716.seq
# -bsequence dna-align/BPUM_2333___hxlA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00615___hxlA-BPUM_2333___hxlA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00615___hxlA-BPUM_2333___hxlA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00615___hxlA
# 2: BPUM_2333___hxlA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 639
# Identity: 448/639 (70.1%)
# Similarity: 448/639 (70.1%)
# Gaps: 12/639 ( 1.9%)
# Score: 1432.5
#
#
#=======================================
BSNT_00615___ 1 ATGGAATTACAGCTTGCATTAGACCTCGTCAACATCCCGGAAGCCATTGA 50
|||.|||||||..|.||||||||..|.||.||.||.||.|||||.|||||
BPUM_2333___h 1 ATGAAATTACAATTAGCATTAGATTTAGTGAATATACCAGAAGCGATTGA 50
BSNT_00615___ 51 GCTCGTCAAAGAGGTAGAACAATACATCGACGTAGTTGAAATCGGAACAC 100
|||..|.|||||.||||||..||..|||||.|||||.|||||.|||||||
BPUM_2333___h 51 GCTGATTAAAGAAGTAGAAGGATCGATCGATGTAGTCGAAATTGGAACAC 100
BSNT_00615___ 101 CGGTCGTCATCAATGAAGGCCTAAGAGCCGTTAAAGAAATAAAAGAAGCA 150
|.||.||.|||||.||||||.|..|.||||||||||||.|.|||.|.|||
BPUM_2333___h 101 CTGTTGTGATCAACGAAGGCTTGCGTGCCGTTAAAGAAGTCAAACAGGCA 150
BSNT_00615___ 151 TTTCCTCAATTGAAG-GTTCTTGCAGACCTGAAAATCATGGATGCCGGAG 199
||||| .||.|.|.| ||.||.||.||.||||||||.||||||||.|..|
BPUM_2333___h 151 TTTCC-AAACTTACGTGTACTCGCCGATCTGAAAATTATGGATGCGGCCG 199
BSNT_00615___ 200 GCTACGAAATTATGAAAGCGTCGGAAGCAGGCGCTGACATCATCATCGTT 249
|.||.|||.|...|.|.||.||.|||||.||.||.||.|||.|.|.|.||
BPUM_2333___h 200 GTTATGAAGTGCAGCAGGCATCTGAAGCTGGAGCAGATATCGTGACCATT 249
BSNT_00615___ 250 TTAGGGGCTACAGACGATGCAACGATTAAAGGCGCAGTAGAAGAAGCCAA 299
.|.|..||..||||.|||....|.|||.||||.||.||..||||||| .
BPUM_2333___h 250 CTTGCAGCGGCAGAAGATATGTCCATTCAAGGAGCGGTGAAAGAAGC--G 297
BSNT_00615___ 300 AAAACAAAAGAAGAAA---ATCTTAGTGGACATGATTAACGTGAAGGATA 346
|||.|||.|| .|||| ||.||||||||.||||||....|.||.||||
BPUM_2333___h 298 AAAGCAAGAG-GGAAACAGATTTTAGTGGATATGATTGGGATCAAAGATA 346
BSNT_00615___ 347 TCGAATCCCGTGCGAAAGAAATTGACGCACTCGGTGTTGACTACATCTGC 396
|||....|||.||.|||||..|.||.|.|||.||.||.||.||.||.||.
BPUM_2333___h 347 TCGCTGGCCGGGCAAAAGAGCTGGATGAACTTGGAGTCGATTATATTTGT 396
BSNT_00615___ 397 GTCCACACTGGCTATGATCTTCAAGCAGAGGGCAAAAACTCTTTCGAAGA 446
||.|||||||||||||||||.|||||.|..||..|||||||.||.|..||
BPUM_2333___h 397 GTGCACACTGGCTATGATCTGCAAGCGGTTGGTCAAAACTCATTTGCTGA 446
BSNT_00615___ 447 ATTAACGACAATCAAAAATACCGTAAAAAACGCAAAAACCGCAATCGCGG 496
..|...|||.||.|||.|...|||.|||.|.||.|||||.||.||.||.|
BPUM_2333___h 447 CCTTCTGACCATTAAACAAGTCGTCAAACAAGCGAAAACAGCGATTGCAG 496
BSNT_00615___ 497 GCGGCATCAAACTTGATACACTGCCAGAAGTGATCAAGCAAAACCCTGAC 546
||||.||.||.||||||||..|.||.|||||..|.||...|||.|||||
BPUM_2333___h 497 GCGGAATTAAGCTTGATACGTTACCTGAAGTCGTGAAATTAAATCCTGA- 545
BSNT_00615___ 547 CTTG-TCATTGTTGGGGGCGGAATTACAAGCGCA-GCTGATAAGGCGGAA 594
.||| |||||||.||.||.||.||..|||| .|| |.|.||||.||.|||
BPUM_2333___h 546 TTTGATCATTGTCGGCGGTGGTATCGCAAG-TCAGGATAATAAAGCAGAA 594
BSNT_00615___ 595 ACAGCTTCAAAAATGAAGCAGCTGATTGTCCAAGGATAA 633
..|||..||.||||||||||||||||.|..|||..||.|
BPUM_2333___h 595 GTAGCCGCACAAATGAAGCAGCTGATCGCACAATCATGA 633
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