Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03817 and BPUM_2299

See Amino acid alignment / Visit BSNT_03817 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:22
# Commandline: needle
#    -asequence dna-align/BSNT_03817___yqeI.1.24716.seq
#    -bsequence dna-align/BPUM_2299___yqeI.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03817___yqeI-BPUM_2299___yqeI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03817___yqeI-BPUM_2299___yqeI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03817___yqeI
# 2: BPUM_2299___yqeI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 297
# Identity:     229/297 (77.1%)
# Similarity:   229/297 (77.1%)
# Gaps:          12/297 ( 4.0%)
# Score: 877.0
# 
#
#=======================================

BSNT_03817___      1 ATGTTAACAGGTAAACAAAAACGTTTTTTGCGTTCTAAAGCGCATCATTT     50
                     |||||||.|||.|||||||||||||||||||||.|.|||||.||||||||
BPUM_2299___y      1 ATGTTAAAAGGGAAACAAAAACGTTTTTTGCGTGCAAAAGCACATCATTT     50

BSNT_03817___     51 AACGCCGATTTTTCAAGTAGGTAAAGGCGGAGTAAACGACAACATGATTA    100
                     |.|.||.||||||||||||||.||||||||.|||||.|||||.||||..|
BPUM_2299___y     51 ATCACCTATTTTTCAAGTAGGAAAAGGCGGGGTAAATGACAATATGACCA    100

BSNT_03817___    101 AACAAATTGCTGAGGCGCTTGAAGCGAGAGAGCTGATTAAA-GTCAGCGT    149
                     |.||.|||.|.|||||||||||||..||||| .|.|||||| ||||||.|
BPUM_2299___y    101 AGCAGATTTCCGAGGCGCTTGAAGTAAGAGA-ATTATTAAAGGTCAGCAT    149

BSNT_03817___    150 GCTTCAGAATTGCGAAGAGGATAAAAACGATGTAGCGGAAGCTCTTGTAA    199
                     ..|.||.||.|||||.|||||.||||..||.||.|||.||||.|||||.|
BPUM_2299___y    150 ATTACAAAACTGCGACGAGGACAAAACGGAAGTTGCGAAAGCACTTGTCA    199

BSNT_03817___    200 AAGG-----AAGCCGCTCTCAATTGGTGCAGACAATCGGCAATACGATTG    244
                     ||||     |||     ||.||.|.||.||.||.|||||.|||..|||||
BPUM_2299___y    200 AAGGTACAAAAG-----CTGAACTTGTTCAAACGATCGGAAATGTGATTG    244

BSNT_03817___    245 TGTTATATAAGGAATCAAAGGAAAATAAACAAATCGAGCTTCCTTAA    291
                     |..|.|||||.|||||.||||||||.||||||||..||||.||.|||
BPUM_2299___y    245 TCCTTTATAAAGAATCGAAGGAAAACAAACAAATTAAGCTGCCGTAA    291


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