Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03799 and BPUM_2285
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:21
# Commandline: needle
# -asequence dna-align/BSNT_03799___yqxA.1.24716.seq
# -bsequence dna-align/BPUM_2285___yqeP.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03799___yqxA-BPUM_2285___yqeP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03799___yqxA-BPUM_2285___yqeP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03799___yqxA
# 2: BPUM_2285___yqeP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 362
# Identity: 217/362 (59.9%)
# Similarity: 217/362 (59.9%)
# Gaps: 52/362 (14.4%)
# Score: 546.0
#
#
#=======================================
BSNT_03799___ 1 TTGATTG---CATACTTTGGAAAATAC--TTACTGCTTGTCACGA-TCAT 44
||.| |||...|||| |||.|| |||.| ||...||.| ||.|
BPUM_2285___y 1 ---ATGGGATCATTTATTGG-AAAGACCATTATT--TTAGGACTAGTCTT 44
BSNT_03799___ 45 GTTTTTAGGCGTTCTGTTCGGCATGCAGCAGGCAAACAACGGGATGCTGA 94
|.|.||.|||||..|.||.||.||||||||.|||||.||.||.|||.||.
BPUM_2285___y 45 GCTATTTGGCGTCTTTTTAGGAATGCAGCAAGCAAATAATGGCATGTTGC 94
BSNT_03799___ 95 GTATGAAAGGCTATCATGACCCTTCACTGAGGGGGGCGTTTACGCTC--A 142
..|||||.||.||.||||||||...|.|.|..|||||.|| ||| .
BPUM_2285___y 95 AAATGAAGGGTTACCATGACCCGCAATTAAAAGGGGCTTT----CTCCAT 140
BSNT_03799___ 143 CCGACGGAA--AAGATAATGAAAAAGAAGCCTCAATCCTAGGAGAAACAG 190
||.|..||| ||||..|.|||..|||||||||.||..|||||..|.|.|
BPUM_2285___y 141 CCAAATGAACGAAGAAGAAGAACGAGAAGCCTCTATTTTAGGAACAGCTG 190
BSNT_03799___ 191 TCACGGCAAAAGATTTAGAAGAAAAACAAAAAGAGCT---GGAAAAGGTG 237
|.||.|.|||.|||.|.|..|||||||||||..|.|| ||||| |.
BPUM_2285___y 191 TTACAGAAAAGGATCTTGCCGAAAAACAAAAGCAACTTGAGGAAA---TA 237
BSNT_03799___ 238 GAGACATTCAATATGTTTTCAAAAGCCGGACAAGCGCTTTC-GA------ 280
||||..||.|||...||.||.||.||.||..|.|||.|.|| ||
BPUM_2285___y 238 GAGAGCTTTAATGCCTTCTCCAAGGCAGGTAAGGCGTTGTCTGATGGCAT 287
BSNT_03799___ 281 -ACACCGTAACCAATACTGCCCAGTCAATGTATGAATGG--ATACGGGAT 327
|||| ||.|.||.|..||..|.||.||.||| |.|.||||
BPUM_2285___y 288 GACAC--------ATGCAGCTCGTTCTCTTTACGATTGGGTAAATGGGA- 328
BSNT_03799___ 328 ATGAATCAATAA 339
|||||
BPUM_2285___y 329 -------AATAA 333
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