Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03796 and BPUM_2283
See
Amino acid alignment /
Visit
BSNT_03796 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:21
# Commandline: needle
# -asequence dna-align/BSNT_03796___hemN.1.24716.seq
# -bsequence dna-align/BPUM_2283___hemN.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03796___hemN-BPUM_2283___hemN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03796___hemN-BPUM_2283___hemN.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03796___hemN
# 2: BPUM_2283___hemN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1191
# Identity: 821/1191 (68.9%)
# Similarity: 821/1191 (68.9%)
# Gaps: 102/1191 ( 8.6%)
# Score: 2649.5
#
#
#=======================================
BSNT_03796___ 1 TTGAAATCAGCTTATATCCATATCCCATTTTGTGAGCATATTTGCCACTA 50
.|||||.||||.||.||.||.||.||||||||||||||.|||||||||||
BPUM_2283___h 1 ATGAAAGCAGCATACATTCACATTCCATTTTGTGAGCACATTTGCCACTA 50
BSNT_03796___ 51 CTGCGATTTCAATAAATATTTTATTCAAAGTCAGCCAGTCGACGAGTATT 100
.||.|||||||||||||.|||.|||.|||..|||||||||||.||.||.|
BPUM_2283___h 51 TTGTGATTTCAATAAATTTTTCATTAAAACGCAGCCAGTCGATGAATACT 100
BSNT_03796___ 101 TAAACGCACTCGAACAGGAAATGATAAATACAAT--AGCAAAAACCGGG- 147
||...||.||.|||.|.||.|||....|.||.|| ||||||| |||
BPUM_2283___h 101 TAGCGGCTCTTGAAAAAGAGATGCAGCACACGATTGAGCAAAA---GGGT 147
BSNT_03796___ 148 CAGCCTGATCTTAAAACAATCTTTATCGGAGGAGGCACGCCAACCTCCCT 197
.|||..||.||.||.||.||||||||.||.||.||.||.|||||.||..|
BPUM_2283___h 148 GAGCAAGAACTAAAGACGATCTTTATTGGCGGGGGGACTCCAACATCATT 197
BSNT_03796___ 198 GTC--TGAGGAACAGCTTAAAAAGCTAATGGACATGATCAACCGCGTGCT 245
|.| |.|| .|||||..|..||||.|||.|||..|||.||||.|||.|
BPUM_2283___h 198 GACCGTCAG--CCAGCTAGATCAGCTCATGAACAGCATCCACCGTGTGTT 245
BSNT_03796___ 246 AAAGCCCTCAAGCGAC----TTATCGGAATTTGCGGTTGAAGCGAATCCG 291
|||.||.||||...|| || ||||||||.||.|||||.||.||.
BPUM_2283___h 246 AAAACCGTCAAAAAACCTGGTT----GAATTTGCAGTGGAAGCAAACCCA 291
BSNT_03796___ 292 GACGACTTGTC-CGCAGAGAAATTAAAAATATTAAAAGAAGCAGGCGTAA 340
||.||.||.|| |.| |||||.||..|..|.|||||||||||.||.||.|
BPUM_2283___h 292 GATGAATTATCACTC-GAGAAGTTGCATGTGTTAAAAGAAGCCGGTGTCA 340
BSNT_03796___ 341 ATCGCCTCAGCTTTGGTGTGCAAACGTTCGAAGACGATCTGTTAGAAAAA 390
||||..|.||||||||.||.|||||.||.|||||.|||||..|..|||||
BPUM_2283___h 341 ATCGGTTAAGCTTTGGCGTCCAAACCTTTGAAGATGATCTACTCAAAAAA 390
BSNT_03796___ 391 ATCGGCCGAGTGCA-CAAGCAA-AAAGATGTATTCACCTCTTTTGAAAGA 438
|||||.|||||.|| ||| || ||||||||..||||.|||||.||..||
BPUM_2283___h 391 ATCGGACGAGTTCATCAA--AAGAAAGATGTTCTCACGTCTTTCGAGCGA 438
BSNT_03796___ 439 GCGCGGGATATCGGTTTTGAGAATATCAGTCTTGATCTCATGTTCGGGCT 488
||..|.|||.||||.|||||.||.||.||.|||||.|||||||| .||||
BPUM_2283___h 439 GCAAGAGATGTCGGATTTGACAACATTAGCCTTGACCTCATGTT-TGGCT 487
BSNT_03796___ 489 T-CCGGGGCAAACCCTC-----AAGCATCTGGAACATTCCATAAA--CAC 530
| ||| |.|| |||||| |||..|||.|| |||
BPUM_2283___h 488 TGCCG--------CATCAAGAAAAGCAT------CATGTCATGAATTCAC 523
BSNT_03796___ 531 T-------GCTTTATCACT-GGATGCCGAGCATTATTCCGTTTACTCCCT 572
| |||||.|||.| ||| ||.|||||||||||.||.|||||.||
BPUM_2283___h 524 TTGAGACAGCTTTCTCATTAGGA-GCAGAGCATTATTCTGTCTACTCACT 572
BSNT_03796___ 573 TATTGTAGAACCGAAAACGGTATTTTATAATTTGATGCAAAAAGGGCGGC 622
.|||||.||.|||||||||||.|||||.||.||.|||||||||||....|
BPUM_2283___h 573 GATTGTGGAGCCGAAAACGGTGTTTTACAACTTAATGCAAAAAGGAAAAC 622
BSNT_03796___ 623 TTCATCTTCCGCCGCAGGAGCAGGAAGCTGAAATGTATGAAATGGTGATG 672
|.|||.|.||.|||||.||.|..||.||||||||||||||..|.||||||
BPUM_2283___h 623 TACATTTACCACCGCAAGAACGTGAGGCTGAAATGTATGAGCTTGTGATG 672
BSNT_03796___ 673 AGCCAGATGGAA------GCTCACGGCATT-CATCAATATGAAATCAGCA 715
||||.|| || ||||| ||| ||||||||.||.|||||||
BPUM_2283___h 673 -----GATGAAATGGAGCGC-CACGG-ATTACATCAATACGAGATCAGCA 715
BSNT_03796___ 716 ACTTTGCTAAGGCAGGCATGGAATCTAAGCACAATCTAACGTATTGGAGC 765
|.|..||.||..|.||..|.|||....||||.||.||.||.|||||||||
BPUM_2283___h 716 ATTACGCCAAACCTGGATTTGAAAGCCAGCATAACCTGACCTATTGGAGC 765
BSNT_03796___ 766 AACGAACAATATTTCGGTTTCGGAGCCGGCGCTCACGGATATATCGGCGG 815
||.|||.|.|||||||||||.||.||.||.||.|||||.|||.|.|..||
BPUM_2283___h 766 AATGAAGACTATTTCGGTTTTGGTGCAGGGGCACACGGGTATGTAGATGG 815
BSNT_03796___ 816 CACACGAACAGTGAACGTCGGACCTGTTAAGCATTACATTGACCTGAT-- 863
||..||||..|||||||..|||||.||.|||||||||.|.||.|||||
BPUM_2283___h 816 CATCCGAAATGTGAACGCAGGACCAGTAAAGCATTACTTGGAACTGATTG 865
BSNT_03796___ 864 AGCTGAAAAGGGTTTTCCGTACAGAGATACACATGAAGTAACAACAGAAG 913
||| |||..||.||.|||.|.|.|||.||.|||.||||.||||.||.||
BPUM_2283___h 866 AGC--AAACTGGGTTCCCGCATAAAGAAACTCATCAAGTCACAAAAGCAG 913
BSNT_03796___ 914 AACAGATTGAGGAAGAAATGTTTTTAGGTTTGAGAAAAACAGCCGGTGTC 963
|||||||.||.|||||||||||||||||..|..||||||..|..||.||
BPUM_2283___h 914 AACAGATAGAAGAAGAAATGTTTTTAGGCCTTCGAAAAATTGAAGGGGT- 962
BSNT_03796___ 964 AGCAAAAAA-----CGATTCGCAGAAAAATACGGCCGTTCCCTGGATGGA 1008
.|||| .|.|||..||..|||||.||...|||.|..||.|..
BPUM_2283___h 963 ----GAAAAGTGCCGGCTTCCAAGCCAAATATGGTGCTTCACCAGAGGCT 1008
BSNT_03796___ 1009 C-TTTTCCCAAGCGTGTTAAAAGACCTCGCTGAAAAAGGGCTGATTCACA 1057
| |||||||..| ||..|..||||..|.|..||||||||.||.|||...|
BPUM_2283___h 1009 CTTTTTCCCTCG-GTTCTTGAAGAATTAGAAGAAAAAGGTCTCATTGTAA 1057
BSNT_03796___ 1058 --------ATTCGGAGTCTGCCGTTTATTTGACTCATCAAGGGAAATTAT 1099
|||.|.|.| |||||| ||.....||||.|||||.|
BPUM_2283___h 1058 AAGATGATATTGGCATT----CGTTTA----ACAAGAAAAGGAAAATTGT 1099
BSNT_03796___ 1100 TAGGCAATGAAGTTTTTGGCGCTTTTTTGGGTGAGTTATAA 1140
||||.||||||||.|||...||.|||.|.||||||||||||
BPUM_2283___h 1100 TAGGAAATGAAGTATTTCAAGCGTTTCTCGGTGAGTTATAA 1140
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.