Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03792 and BPUM_2280
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Amino acid alignment /
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:20
# Commandline: needle
# -asequence dna-align/BSNT_03792___dnaK.1.24716.seq
# -bsequence dna-align/BPUM_2280___dnaK.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03792___dnaK-BPUM_2280___dnaK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03792___dnaK-BPUM_2280___dnaK.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03792___dnaK
# 2: BPUM_2280___dnaK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1853
# Identity: 1545/1853 (83.4%)
# Similarity: 1545/1853 (83.4%)
# Gaps: 28/1853 ( 1.5%)
# Score: 6534.0
#
#
#=======================================
BSNT_03792___ 1 GTGAGTAAAGTTATCGGAATCGACTTAGGAACAACAAACTCATGTGTGGC 50
.||||||||.|.||.||.||.||||||||||||||||||||||||||.||
BPUM_2280___d 1 ATGAGTAAAATCATTGGGATTGACTTAGGAACAACAAACTCATGTGTTGC 50
BSNT_03792___ 51 AGTTCTTGAAGGCGGCGAGCCTAAAGTGATTGCTAACGCTGAAGGAAACC 100
|||.|||||||||||.|||||.|||||.|||||.||||||||||||...|
BPUM_2280___d 51 AGTACTTGAAGGCGGAGAGCCAAAAGTCATTGCAAACGCTGAAGGAGCAC 100
BSNT_03792___ 101 GCACAACGCCATCAGTTGTTGCGTTCAAAAACGGCGAACGCCAAGTAGGG 150
|.|||||.|||||.|||||.||.||.|||||.||.||.||||||||.||.
BPUM_2280___d 101 GTACAACACCATCTGTTGTCGCCTTTAAAAATGGAGAGCGCCAAGTTGGT 150
BSNT_03792___ 151 GAAGTGGCTAAACGCCAATCTATTACAAACCCTAACACAATTATGTCTAT 200
|||||.||.|||||||||||.|||||||||||.||||||||.||||||.|
BPUM_2280___d 151 GAAGTAGCGAAACGCCAATCAATTACAAACCCGAACACAATCATGTCTGT 200
BSNT_03792___ 201 CAAACGTCATATGGGTACTGATTATAAAGTTGAAATTGAAGGAAAGGATT 250
.|||.|.|||||||||||.|||||||||||.|||.|||||||.|||.|.|
BPUM_2280___d 201 TAAAAGACATATGGGTACAGATTATAAAGTAGAAGTTGAAGGCAAGAACT 250
BSNT_03792___ 251 ACACTCCACAAGAAGTGTCTGCTATCATCCTTCAACACCTTAAATCATAC 300
||||.||.||.|||.|.|||||.|||||.||||||||.||||||||||||
BPUM_2280___d 251 ACACGCCGCAGGAAATCTCTGCAATCATTCTTCAACATCTTAAATCATAC 300
BSNT_03792___ 301 GCTGAAAGCTATCTTGGCGAAACAGTATCAAAAGCAGTTATCACAGTTCC 350
||||||.||||.|||||||||..||||.|||||||.||||||||||||||
BPUM_2280___d 301 GCTGAAGGCTACCTTGGCGAAGAAGTAACAAAAGCTGTTATCACAGTTCC 350
BSNT_03792___ 351 TGCATACTTTAACGATGCTGAGCGTCAAGCAACAAAAGACGCTGGTAAAA 400
.||.|||||.||||||||.||.||||||||.||||||||.||||||||||
BPUM_2280___d 351 AGCTTACTTCAACGATGCAGAACGTCAAGCGACAAAAGATGCTGGTAAAA 400
BSNT_03792___ 401 TTGCCGGTCTTGAAGTAGAACGTATCATCAACGAGCCGACTGCAGCAGCG 450
||||.|||||||||||||||||||||||||||||.||.||.|||||.|||
BPUM_2280___d 401 TTGCTGGTCTTGAAGTAGAACGTATCATCAACGAACCAACAGCAGCTGCG 450
BSNT_03792___ 451 CTTGCATACGGACTTGATAAAACAGATGAAGATCAAACGATCCTAGTATA 500
|||||.||.||..|.|||||||||||||||||||||||||||||.|||||
BPUM_2280___d 451 CTTGCTTATGGTTTAGATAAAACAGATGAAGATCAAACGATCCTTGTATA 500
BSNT_03792___ 501 CGACCTTGGCGGCGGTACATTCGACGTTTCCATCCTTGAGCTTGGCGACG 550
|||||||||.|||||||||||.|||||.||..|||||||||||||.||||
BPUM_2280___d 501 CGACCTTGGTGGCGGTACATTTGACGTATCAGTCCTTGAGCTTGGAGACG 550
BSNT_03792___ 551 GTGTATTCGAAGTTCGTTCAACTGCCGGCGACAACCGTCTGGGCGGGGAC 600
|.||.||.|||||.||.||||||||.||.|||||||||||.||.||.|||
BPUM_2280___d 551 GCGTCTTTGAAGTACGCTCAACTGCTGGGGACAACCGTCTAGGTGGAGAC 600
BSNT_03792___ 601 GATTTTGACCAAGTTATCATCGATCATCTTGTGTCTGAATTCAAAAAAGA 650
||||||||||||||.|||||.|||||.||.|||.||||||||||||||||
BPUM_2280___d 601 GATTTTGACCAAGTGATCATTGATCACCTAGTGGCTGAATTCAAAAAAGA 650
BSNT_03792___ 651 AAACGGCATTGATTTGTCAAAAGACAAAATGGCGCTTCAGCGTTTGAAAG 700
|||.||||||||..|.||||||||.||||||||||||||||||||.||||
BPUM_2280___d 651 AAATGGCATTGACCTTTCAAAAGATAAAATGGCGCTTCAGCGTTTAAAAG 700
BSNT_03792___ 701 ACGCAGCTGAAAAAGCGAAAAAAGATCTTTCCGGCGTTTCTTCTACGCAA 750
|.||.|||||||||||.||||||||||||||.||.||.||||||||.|||
BPUM_2280___d 701 ATGCTGCTGAAAAAGCAAAAAAAGATCTTTCTGGTGTATCTTCTACACAA 750
BSNT_03792___ 751 ATTTCTTTACCGTTTATCACAGCTGGAGAAGCAGGACCGCTTCACCTTGA 800
||.||.||.||.|||||.|||||||||||.|||||.||.|||||||||||
BPUM_2280___d 751 ATCTCATTGCCATTTATTACAGCTGGAGATGCAGGTCCTCTTCACCTTGA 800
BSNT_03792___ 801 ACTTACATTAACTCGCGCTAAATTCGAAGAGCTTTCTTCTCATTTAGTAG 850
|.|.||..||||.||.|||||||||||||||||||||.|..||.|.||||
BPUM_2280___d 801 ATTAACGCTAACGCGTGCTAAATTCGAAGAGCTTTCTGCAGATCTTGTAG 850
BSNT_03792___ 851 AGCGCACAATGGGTCCTGTCCGTCAAGCGCTTCAAGATGCAGGACTTTCT 900
||||.||||||...|||||.||||||.|..|..|||||||.||..|.|||
BPUM_2280___d 851 AGCGTACAATGACACCTGTACGTCAATCATTAAAAGATGCTGGTTTATCT 900
BSNT_03792___ 901 GCAAGCGAAATAGACAAAGTCATCCTTGTCGGCGGATCAACTCGTATCCC 950
||.|||||.||.||.||||||||||||||.||.||||||||||||||.||
BPUM_2280___d 901 GCTAGCGAGATTGATAAAGTCATCCTTGTTGGTGGATCAACTCGTATTCC 950
BSNT_03792___ 951 TGCCGTACAAGAAGCAATCAAAAAAGAAACTGGAAAAGAAGCGCATAAAG 1000
|||.||||||||||||||||||||||||||.||.|||||..|.|||||||
BPUM_2280___d 951 TGCAGTACAAGAAGCAATCAAAAAAGAAACAGGCAAAGAGCCTCATAAAG 1000
BSNT_03792___ 1001 GCGTAAACCCGGATGAAGTTGTAGCGCTTGGTGCTGCGATTCAGGGCGGC 1050
|.||||||||.||||||||.||.||.||||||||.|||||.||.||.||.
BPUM_2280___d 1001 GTGTAAACCCTGATGAAGTGGTTGCTCTTGGTGCGGCGATCCAAGGTGGA 1050
BSNT_03792___ 1051 GTTATCACAGGTGACGTAAAAGACGTTGTTCTTCTTGACGTTACACCGCT 1100
||.||||||||.||.||.|||||||||||||||||||||||.|||||.||
BPUM_2280___d 1051 GTCATCACAGGAGATGTCAAAGACGTTGTTCTTCTTGACGTAACACCACT 1100
BSNT_03792___ 1101 TTCTCTCGGTATCGAAACAATGGGCGGCGTGTTTACAAAACTGATCGACC 1150
||||.|.||.||.|||||||||||||||||.||.|||||.|||||.||.|
BPUM_2280___d 1101 TTCTTTAGGAATTGAAACAATGGGCGGCGTATTCACAAAGCTGATTGAAC 1150
BSNT_03792___ 1151 GCAACACGACGATCCCGACAAGCAAATCTCAAGTGTTCTCAACTGCTGCT 1200
|.||.||.||.||.||.|||||.|||||||||||.||||||||.||||||
BPUM_2280___d 1151 GTAATACAACAATTCCAACAAGTAAATCTCAAGTATTCTCAACAGCTGCT 1200
BSNT_03792___ 1201 GATAACCAAACAGCTGTTGATATCCATGTTCTTCAAGGTGAGCGCCCAAT 1250
||.|||||||||||.||.||.||||||||.||.||||||||.||||||||
BPUM_2280___d 1201 GACAACCAAACAGCGGTAGACATCCATGTCCTGCAAGGTGAACGCCCAAT 1250
BSNT_03792___ 1251 GTCTGCCGACAACAAAACACTCGGCCGCTTCCAGCTTACTGATATCCCGC 1300
|.|.||.||||||||||||.|.||.||.|||||..|.|||||.||.||||
BPUM_2280___d 1251 GGCAGCAGACAACAAAACATTAGGTCGTTTCCAATTGACTGACATTCCGC 1300
BSNT_03792___ 1301 CAGCACCGCGCGGCGTGCCTCAAATCGAAGTTTCTTTCGATATTGACAAA 1350
|||||||.||||||||.||.|||||||||||.|||||.|||||.||.|||
BPUM_2280___d 1301 CAGCACCACGCGGCGTACCACAAATCGAAGTCTCTTTTGATATCGATAAA 1350
BSNT_03792___ 1351 AATGGTATCGTAAACGTAAGAGCAAAAGACTTAGGCACAGGAAAAGAACA 1400
||.|||||.||.||||||.|.||.|||||..|.||.|||||.|||||.||
BPUM_2280___d 1351 AACGGTATTGTCAACGTACGTGCGAAAGATATGGGTACAGGCAAAGAGCA 1400
BSNT_03792___ 1401 AAACATTACAATCAAATCTTCTTCAGGTCTTTCAGATGAAGAGATCGAAC 1450
||||||.||||||||||||||||||||||||||.|||||.|||||||||.
BPUM_2280___d 1401 AAACATCACAATCAAATCTTCTTCAGGTCTTTCTGATGATGAGATCGAAA 1450
BSNT_03792___ 1451 GCATGGTAAAAGAAGCGGAAGAAAATGCTGACGCTGATGCGAAGAAAAAA 1500
..|||||.||||||||.||||||||||||||.||.|||||||||||||||
BPUM_2280___d 1451 AAATGGTTAAAGAAGCAGAAGAAAATGCTGAAGCAGATGCGAAGAAAAAA 1500
BSNT_03792___ 1501 GAAGAAATCGAAGTCCGCAACGAAGCAGATCAGCT--TGTTTTCCAAACT 1548
||||||||||||||.|||||.|||||||||||..| |||||.| ||||
BPUM_2280___d 1501 GAAGAAATCGAAGTGCGCAATGAAGCAGATCAATTAGTGTTTAC--AACT 1548
BSNT_03792___ 1549 GAGAAAACATTAAAAGATCTTGAAGGCAAAGTGGATGAAGAACAAGTGAA 1598
||.|||||||||||||||||.|||||||||.|.||||||||.||||||||
BPUM_2280___d 1549 GAAAAAACATTAAAAGATCTAGAAGGCAAAATCGATGAAGAGCAAGTGAA 1598
BSNT_03792___ 1599 AAAAGCCAACGATGCCAAAGACGCTTTAAAAGCAGCAATTGAGAAAAACG 1648
||||||.|||||.||.|||||.||..|||||||.||.||.||.|||..||
BPUM_2280___d 1599 AAAAGCAAACGACGCGAAAGATGCCCTAAAAGCTGCGATCGAAAAAGGCG 1648
BSNT_03792___ 1649 AATTTGAAGAGATCAAAGCGAAAAAAGATGAGCTTCAAACAATCGTTCAA 1698
|..|||||||.|||||||||||||||||||||||.|||||||||||||||
BPUM_2280___d 1649 AGCTTGAAGACATCAAAGCGAAAAAAGATGAGCTGCAAACAATCGTTCAA 1698
BSNT_03792___ 1699 GAGCTTTCTATGAAGCTTTATGAAGAAGCTGCTA---------AAGCACA 1739
||.||..|.|..|||||.||||||||||||||.| ||||.||
BPUM_2280___d 1699 GAACTAACGACAAAGCTCTATGAAGAAGCTGCAAAACAAGCACAAGCTCA 1748
BSNT_03792___ 1740 GCAAGCTCAAGGCGGAGCAAACGCTGAAGG------CAAAGCGGATGACA 1783
||||| ||||||| ||||||||| .|||||.|||||||
BPUM_2280___d 1749 GCAAG---AAGGCGG------CGCTGAAGGTGCTCAAAAAGCAGATGACA 1789
BSNT_03792___ 1784 ACGTTGTCGACGCTGAATACGAAGAAGTAAACGACGACCAAAACAAAAAA 1833
|.||.||.||.||.|||||||||||||||||||||||.|||.|.||||||
BPUM_2280___d 1790 ATGTAGTGGATGCAGAATACGAAGAAGTAAACGACGATCAAGAGAAAAAA 1839
BSNT_03792___ 1834 TAA 1836
|||
BPUM_2280___d 1840 TAA 1842
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