Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03785 and BPUM_2274
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:20
# Commandline: needle
# -asequence dna-align/BSNT_03785___rpsU.1.24716.seq
# -bsequence dna-align/BPUM_2274___rpsU.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03785___rpsU-BPUM_2274___rpsU.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03785___rpsU-BPUM_2274___rpsU.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03785___rpsU
# 2: BPUM_2274___rpsU
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 174
# Identity: 166/174 (95.4%)
# Similarity: 166/174 (95.4%)
# Gaps: 0/174 ( 0.0%)
# Score: 798.0
#
#
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BSNT_03785___ 1 ATGTCAAAAACGGTCGTTAGAAAAAACGAATCGCTTGAAGATGCTCTTCG 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_2274___r 1 ATGTCAAAAACGGTCGTTAGAAAAAACGAATCGCTTGAAGATGCTCTTCG 50
BSNT_03785___ 51 TCGCTTCAAACGCAGTGTATCAAAGACAGGTACTTTGCAAGAAGCAAGAA 100
||||||.||||||||||||||.||.||.||.||.||||||||||||||||
BPUM_2274___r 51 TCGCTTTAAACGCAGTGTATCCAAAACTGGAACATTGCAAGAAGCAAGAA 100
BSNT_03785___ 101 AGCGTGAATTTTATGAAAAACCTAGCGTAAAGCGCAAGAAAAAGTCTGAA 150
|||||||||||||||||||.||||||||||||||||||||||||||||||
BPUM_2274___r 101 AGCGTGAATTTTATGAAAAGCCTAGCGTAAAGCGCAAGAAAAAGTCTGAA 150
BSNT_03785___ 151 GCTGCTAGAAAACGCAAATTCTAA 174
||||||||||||||.|||||||||
BPUM_2274___r 151 GCTGCTAGAAAACGTAAATTCTAA 174
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