Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03784 and BPUM_2273
See
Amino acid alignment /
Visit
BSNT_03784 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:20
# Commandline: needle
# -asequence dna-align/BSNT_03784___yqeY.1.24716.seq
# -bsequence dna-align/BPUM_2273___yqeY.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03784___yqeY-BPUM_2273___yqeY.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03784___yqeY-BPUM_2273___yqeY.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03784___yqeY
# 2: BPUM_2273___yqeY
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 459
# Identity: 371/459 (80.8%)
# Similarity: 371/459 (80.8%)
# Gaps: 21/459 ( 4.6%)
# Score: 1521.0
#
#
#=======================================
BSNT_03784___ 1 ATGAGTCTTCTTGAGC-------GTCTCAACCAGGATATGAAGCTGTAT- 42
|||||||||||||||| .||| ||||||||||| |||
BPUM_2273___y 1 ATGAGTCTTCTTGAGCAATTAAATTCT-------GATATGAAGCT-TATG 42
BSNT_03784___ 43 ATGAAAAACCGTGAGAAAGACAAACTGACTGTCGTTCGAATGGTTAAGGC 92
|||||||||||||||||||||||.||...||||.||||.|||||.|||||
BPUM_2273___y 43 ATGAAAAACCGTGAGAAAGACAAGCTTGTTGTCATTCGGATGGTAAAGGC 92
BSNT_03784___ 93 TTCACTTCAAAATGAAGCAATTAAGCTTAAGAAAGACAGTTTGACCGAGG 142
|||.||.||||||||||||||||||||||||||||||||||||||||..|
BPUM_2273___y 93 TTCGCTCCAAAATGAAGCAATTAAGCTTAAGAAAGACAGTTTGACCGGCG 142
BSNT_03784___ 143 ATGAGGAACTCACTGTCCTTTCTCGTGAACTTAAGCAACGTAAAGACTCC 192
||||||||||.||.||||||||.||.||..||||||||||||||||||||
BPUM_2273___y 143 ATGAGGAACTAACCGTCCTTTCCCGCGAGATTAAGCAACGTAAAGACTCC 192
BSNT_03784___ 193 CTCCAGGAATTTTCAAACGCTAATCGTTTAGATTTAGTAGATAAAGTTCA 242
|||||.||||||||.||.||||||||.|||||||||||||||||||||||
BPUM_2273___y 193 CTCCATGAATTTTCGAAAGCTAATCGCTTAGATTTAGTAGATAAAGTTCA 242
BSNT_03784___ 243 AAAAGAGCTGGACATTTTAGAAGTTTATTTACCTGAGCAGCTGTCAGAAG 292
|||||||.|.|||||.|||||.||||||||||||||.|||||.||.||||
BPUM_2273___y 243 AAAAGAGATTGACATCTTAGACGTTTATTTACCTGAACAGCTTTCTGAAG 292
BSNT_03784___ 293 AAGAGCTGCGTACAATCGTAAATGATACCATCGCGGAGGTCGGTGCGAGC 342
||||.||||..||.|||||.||.||.||.||||..||....|||||....
BPUM_2273___y 293 AAGAACTGCAAACGATCGTGAAAGAGACGATCGATGAAACAGGTGCTTCA 342
BSNT_03784___ 343 TCAAAAGCGGACATGGGCAAAGTGATGGGGGCAATTATGCCTAAAGTAAA 392
||.||.||.||.|||||.|||||.|||.|.||.||||||||.||||||||
BPUM_2273___y 343 TCGAAGGCTGATATGGGTAAAGTCATGAGCGCTATTATGCCAAAAGTAAA 392
BSNT_03784___ 393 AGGTAAAGCTGACGGAAGTTTAATTAATAAACTTGTGAGC-AGTCAACTG 441
||||||||||||.|||..|.|.|||||.|.||||||.||| || ||.|||
BPUM_2273___y 393 AGGTAAAGCTGATGGAGCTGTCATTAACAGACTTGTCAGCGAG-CAGCTG 441
BSNT_03784___ 442 TCTTAA--- 447
|||.||
BPUM_2273___y 442 TCTCAATAA 450
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.