Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03782 and BPUM_2271
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:19
# Commandline: needle
# -asequence dna-align/BSNT_03782___yqfA.1.24716.seq
# -bsequence dna-align/BPUM_2271___yqfA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03782___yqfA-BPUM_2271___yqfA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03782___yqfA-BPUM_2271___yqfA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03782___yqfA
# 2: BPUM_2271___yqfA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 999
# Identity: 781/999 (78.2%)
# Similarity: 781/999 (78.2%)
# Gaps: 9/999 ( 0.9%)
# Score: 3028.0
#
#
#=======================================
BSNT_03782___ 1 ATGGATCCGTCAACACTTATGATT-CTGGCAATTGTCGCAGTAGCGATCA 49
|||||||||||.|| .||||.||| .|.|..|||.||||||.||...|.|
BPUM_2271___y 1 ATGGATCCGTCTAC-TTTATTATTATTTGTGATTATCGCAGCAGGTCTGA 49
BSNT_03782___ 50 TTGTTTTGGCAGTATTTTTTACATTTGTGCCTGTAATGCTTTGGATTTCA 99
|.|||.|..|..|.||.||.||.|||||.||.||.|||||.||||||||.
BPUM_2271___y 50 TCGTTCTATCGATCTTCTTCACCTTTGTACCGGTGATGCTGTGGATTTCT 99
BSNT_03782___ 100 GCTTTGGCAGCCGGAGTGAAAATCAGCATTTTCACTCTAGTTGGGATGAG 149
||..|.||.||.||.||.|.|.|.||||||||.||.||.||.||.|||||
BPUM_2271___y 100 GCCCTAGCGGCTGGCGTAAGAGTGAGCATTTTTACACTTGTAGGAATGAG 149
BSNT_03782___ 150 GCTTCGCCGTGTCATTCCGAATCGGGTTGTTAACCCGCTGATTAAAGCCC 199
.||||||||.||.|||||.||.||.||.||.||.|||||.||.|||||.|
BPUM_2271___y 150 ACTTCGCCGAGTTATTCCAAACCGAGTGGTCAATCCGCTCATCAAAGCAC 199
BSNT_03782___ 200 ATAAAGCGGGACTTAATGTTGGA--ACAAACCAGCTTGAAAGCCACTACC 247
|||||||.||.|||.|||| || |..|||||.||.|||||.||.||||
BPUM_2271___y 200 ATAAAGCAGGTCTTGATGT--GACGATTAACCAACTAGAAAGTCATTACC 247
BSNT_03782___ 248 TGGCTGGAGGTAATGTTGACAGAGTCGTCAACGCGCTTATCGCCGCTCAG 297
|.||.||.|||||.||||||.||||.||.||.||..|.|||||.|||||.
BPUM_2271___y 248 TTGCAGGTGGTAACGTTGACCGAGTTGTAAATGCATTAATCGCGGCTCAA 297
BSNT_03782___ 298 CGAGCTAACATTGAACTCACATTCGAGCGCTGTGCTGCCATTGATCTTGC 347
||.||.||.||||||.|.|..||.|..||||||||.||.||.||.||.||
BPUM_2271___y 298 CGTGCGAATATTGAATTGAACTTTGCCCGCTGTGCAGCAATCGACCTAGC 347
BSNT_03782___ 348 AGGCCGGGACGTGTTGGAAGCTGTTCAAATGAGCGTTAATCCTAAGGTGA 397
||||||.|||||..|.||||||||.||||||||.||.||.|||||.||.|
BPUM_2271___y 348 AGGCCGTGACGTACTTGAAGCTGTACAAATGAGTGTAAACCCTAAAGTCA 397
BSNT_03782___ 398 TTGAAACACCGTTCATTGCCGGTGTTGCAATGGACGGGATTGAAGTGAAA 447
||||||||||.||.||..|.|||||.||||||||||||||||||||.|||
BPUM_2271___y 398 TTGAAACACCATTTATCTCTGGTGTGGCAATGGACGGGATTGAAGTAAAA 447
BSNT_03782___ 448 GCGAAAGCGAGAATCACAGTAAGAGCGAATATCGAGCGCCTCGTCGGGGG 497
||.|||||..|.||||||||..|.||.||.|||||.||.||.|||||.||
BPUM_2271___y 448 GCAAAAGCACGTATCACAGTTCGTGCAAACATCGAACGACTTGTCGGTGG 497
BSNT_03782___ 498 AGCAGGGGAAGAAACCATTGTAGCTCGTGTAGGTGAGGGGATCGTTTCTA 547
.||.|||||||||||.|||.|.||||||||||||||.|||||.||.||||
BPUM_2271___y 498 TGCTGGGGAAGAAACAATTATTGCTCGTGTAGGTGAAGGGATTGTCTCTA 547
BSNT_03782___ 548 CAATCGGTTCATCTGATAATCATAAAAAAGTGCTTGAAAACCCTGACATG 597
||||||||||.||..||||||||||||..||.||.||||||||.||.|||
BPUM_2271___y 548 CAATCGGTTCGTCAAATAATCATAAAAGGGTTCTAGAAAACCCAGATATG 597
BSNT_03782___ 598 ATTTCTCAGACAGTCCTTGGAAAAGGATTGGACTCAGGAACTGCGTTTGA 647
||||||||.||.||.|||||.|||||.||.||.|||||.|||||.|||||
BPUM_2271___y 598 ATTTCTCAAACGGTTCTTGGTAAAGGGTTAGATTCAGGTACTGCATTTGA 647
BSNT_03782___ 648 AATTCTCTCAATTGATATTGCAGATGTAGATATCGGCAAAAACATCGGTG 697
|||||||||.||||||||.||||||||.||||||||.||.||||||||.|
BPUM_2271___y 648 AATTCTCTCGATTGATATCGCAGATGTGGATATCGGTAAGAACATCGGGG 697
BSNT_03782___ 698 CAATTTTACAAACCGATCAGGCTGAGGCTGATAAAAACATCGCGCAGGCA 747
|||||.|.|||||.||.||.||.||.||.|||||||||||.||.||||||
BPUM_2271___y 698 CAATTCTGCAAACAGACCAAGCAGAAGCAGATAAAAACATTGCACAGGCA 747
BSNT_03782___ 748 AAAGCGGAAGAACGACGTGCGATGGCTGTCGCTCAAGAACAGGAAATGCG 797
|||||.||||||||.||.||.||||||||.||.||.||.||.||||||||
BPUM_2271___y 748 AAAGCTGAAGAACGCCGCGCAATGGCTGTTGCCCAGGAGCAAGAAATGCG 797
BSNT_03782___ 798 TGCCCGCGTAGAAGAAATGCGCGCGAAAGTAGTAGAAGCCGAGGCGGAAG 847
|||....||.||||||||||||||||||||.|||||||||||||||||||
BPUM_2271___y 798 TGCGAAAGTTGAAGAAATGCGCGCGAAAGTCGTAGAAGCCGAGGCGGAAG 847
BSNT_03782___ 848 TGCCGCTTGCGATGGCAGAAGCTTTGCGCGAAGGGAATATTGGCGTCATG 897
|.||.|||||.|||||.|||||.||.||.||||||||||||||.||||||
BPUM_2271___y 848 TACCACTTGCCATGGCTGAAGCGTTACGTGAAGGGAATATTGGAGTCATG 897
BSNT_03782___ 898 GATTACATGAATATCAAGAATATCGATGCTGACACAGAAATGCGTGATTC 947
||.|||||||||||.|||||||||||||||||.||.||.|||.|.|||||
BPUM_2271___y 898 GACTACATGAATATTAAGAATATCGATGCTGATACGGATATGAGAGATTC 947
BSNT_03782___ 948 ATTCGGCAAGCTGACGAAAGACCCTTCGGATGAAGACCGCAAATCATAA 996
|||.||.||..||||.||||..||.||.|||.|.||...|||||.|
BPUM_2271___y 948 ATTTGGTAAAATGACAAAAGGTCCATCTGATAATGAAAACAAATAA--- 993
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