Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03775 and BPUM_2264
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:18
# Commandline: needle
# -asequence dna-align/BSNT_03775___yqfG.1.24716.seq
# -bsequence dna-align/BPUM_2264___yqfG.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03775___yqfG-BPUM_2264___yqfG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03775___yqfG-BPUM_2264___yqfG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03775___yqfG
# 2: BPUM_2264___yqfG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 492
# Identity: 350/492 (71.1%)
# Similarity: 350/492 (71.1%)
# Gaps: 30/492 ( 6.1%)
# Score: 1184.0
#
#
#=======================================
BSNT_03775___ 1 ATGAGTTTACTGATTGATATCGTTGATGAAACAGGAAGCGTCTCAGAAGA 50
||||..||..|.||||||.|..|.||||||||||||...||.|||.||||
BPUM_2264___y 1 ATGACATTGTTAATTGATTTAATAGATGAAACAGGACAAGTATCAAAAGA 50
BSNT_03775___ 51 GCTGCTCAAAGAAGTAGAAAATCTGCTTCAATTTGCCGCTGA---GCGTG 97
||..||..|||||||.|||||.||.|||||.||.||.||||| .|.||
BPUM_2264___y 51 GCAACTTGAAGAAGTGGAAAAGCTTCTTCAGTTCGCTGCTGATGCCCTTG 100
BSNT_03775___ 98 AAGGCGTTCAAGACCAGGCTGAAGTTTCTGTCACGATTGTTTCCAATGAT 147
| .|||.||||.||.||.||.||.||.||.|||||.||.||.|||||.
BPUM_2264___y 101 A---GGTTAAAGATCAAGCGGAGGTATCAGTGACGATCGTCTCGAATGAA 147
BSNT_03775___ 148 GACATACATCAGATTAACAAAGAATACCGGGGAAAGGATGCTCCGACAGA 197
||.||.|||||.||.||.|||||||||||.|||||.||.||.||.||.||
BPUM_2264___y 148 GAGATTCATCAAATCAATAAAGAATACCGCGGAAAAGACGCACCAACGGA 197
BSNT_03775___ 198 TGTCATCTCATTTGCTCTTGAAGAAGAGGGAGAAGGCGAGATCGAAATCG 247
|||.|||||||||||.|||||.|||||.||||||||.||.||.||||||.
BPUM_2264___y 198 TGTGATCTCATTTGCACTTGAGGAAGAAGGAGAAGGGGAAATTGAAATCA 247
BSNT_03775___ 248 TGGGCGC---CGAAATGCCTCCGGTTTTAGGTGATATTATCATCAGTGCC 294
|.||.|| .||.||.||.||.||..|.||.||.||.|||||.||||..
BPUM_2264___y 248 TTGGTGCTGATGATATTCCGCCAGTACTTGGCGACATCATCATTAGTGTG 297
BSNT_03775___ 295 GATCGCACAAGAGAGCAGGCAGAGGAGTATAATCATTCTTTTAAAAGAGA 344
||.||.||.|.|||||||||||||||.|||...|||||.||||..|||||
BPUM_2264___y 298 GACCGTACGAAAGAGCAGGCAGAGGAATATGGACATTCCTTTATGAGAGA 347
BSNT_03775___ 345 GCTCGGATTTCTAGCTGTACACGGATTTCTGCACCTTT--TAGGATATGA 392
|||.|||||.||..|..|.||.||||||||||| ||| |.||.|.|||
BPUM_2264___y 348 GCTTGGATTCCTCACCATTCATGGATTTCTGCA--TTTGCTCGGGTTTGA 395
BSNT_03775___ 393 CCATATGACGAAAGAGGAA---GAAGAGGAGATGTTTACTAAGCA---AA 436
.|||||||| ||||||| |||.|.||.|||||..|.||.|| ||
BPUM_2264___y 396 TCATATGAC---AGAGGAAGATGAAAAAGAAATGTTCGCCAAACAGACAA 442
BSNT_03775___ 437 AGGAATTGC-TGGACGCTTATGGACTCAAAAGATCATAG--- 474
|| || | ||||.|.||||||.||...||||||.|.|
BPUM_2264___y 443 AG--AT--CTTGGATGATTATGGCCTTTCAAGATCTTCGTAA 480
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