Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03772 and BPUM_2263
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:18
# Commandline: needle
# -asequence dna-align/BSNT_03772___cdd.1.24716.seq
# -bsequence dna-align/BPUM_2263___cdd.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03772___cdd-BPUM_2263___cdd.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03772___cdd-BPUM_2263___cdd.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03772___cdd
# 2: BPUM_2263___cdd
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 422
# Identity: 293/422 (69.4%)
# Similarity: 293/422 (69.4%)
# Gaps: 34/422 ( 8.1%)
# Score: 1017.0
#
#
#=======================================
BSNT_03772___ 1 ATGAACAGACAAGAATTAATAACAGAAGCTTTAAAAGCGCGTGATATGGC 50
|||||||.||||||.||.||..|||||||..|.|||||..|.||..|.||
BPUM_2263___c 1 ATGAACAAACAAGAGTTGATTTCAGAAGCAATTAAAGCAAGGGACTTTGC 50
BSNT_03772___ 51 ATATACGCCGTATTCCAAATTCCAAGTAGGAGCCGCTCTTCTTACCAAGG 100
||||...||.|||||.||||||.||||.||.||.||..|.||..|.||.|
BPUM_2263___c 51 ATATGTACCCTATTCAAAATTCAAAGTCGGTGCAGCATTACTGTCGAATG 100
BSNT_03772___ 101 ATGGAAAAGTGTACAGAGGCTGCAACATTGAGAACGCGGCATACAGCATG 150
||||||.||||||..|.||||||||||||||.||.||.|||||..|.|||
BPUM_2263___c 101 ATGGAACAGTGTATGGCGGCTGCAACATTGAAAATGCAGCATATGGTATG 150
BSNT_03772___ 151 TGCAATTGCGCCGAGCGTACTGCTTTATTTAAAGCTGTTTCTGAAGGGGA 200
||.|||||.||.||..|.||.||..|.||||||||...|||.||| ||.|
BPUM_2263___c 151 TGTAATTGTGCGGAAAGAACAGCACTTTTTAAAGCCTATTCAGAA-GGCA 199
BSNT_03772___ 201 T-ACAGAGTTTCAGATGCTGGCCGTTGCGGCTGACACCCCTGGACCG--- 246
| |||..||||||.|||||.||.||.|.||||||.|| .|||||
BPUM_2263___c 200 TCACATCGTTTCAAATGCTAGCAGTAGTGGCTGATAC----AGACCGTCC 245
BSNT_03772___ 247 -GTATCTCCGTGCGGAGCCTGCCGCCAGGTGATTTCTGAGCTTTGCACAA 295
||.||.||||||||.||.|||.|.|||||.|||||.|||||.||..||.
BPUM_2263___c 246 TGTTTCGCCGTGCGGGGCATGCAGACAGGTCATTTCAGAGCTATGTGCAC 295
BSNT_03772___ 296 AAGAC------GTTATTGTCGTACTAACTAATTTACAAGGACAAATAAAA 339
..||| ||.||| |||||.||.|||.|||||||||||.|.
BPUM_2263___c 296 CTGACATGCCAGTGATT------CTAACGAACTTAAAAGGACAAATATAC 339
BSNT_03772___ 340 GAAATGACTGTGGAAGATTTATTGCCAGGCGCATTTTCATCGGAGGATTT 389
||||..||.||..|.||..||||||||||||||||||||.||||||||||
BPUM_2263___c 340 GAAACAACAGTAAATGAACTATTGCCAGGCGCATTTTCACCGGAGGATTT 389
BSNT_03772___ 390 ACATGACGAACGAAAGCTTTAA 411
|.|||||.||
BPUM_2263___c 390 AAATGACTAA------------ 399
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