Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03772 and BPUM_2263

See Amino acid alignment / Visit BSNT_03772 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:18
# Commandline: needle
#    -asequence dna-align/BSNT_03772___cdd.1.24716.seq
#    -bsequence dna-align/BPUM_2263___cdd.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03772___cdd-BPUM_2263___cdd.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03772___cdd-BPUM_2263___cdd.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03772___cdd
# 2: BPUM_2263___cdd
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 422
# Identity:     293/422 (69.4%)
# Similarity:   293/422 (69.4%)
# Gaps:          34/422 ( 8.1%)
# Score: 1017.0
# 
#
#=======================================

BSNT_03772___      1 ATGAACAGACAAGAATTAATAACAGAAGCTTTAAAAGCGCGTGATATGGC     50
                     |||||||.||||||.||.||..|||||||..|.|||||..|.||..|.||
BPUM_2263___c      1 ATGAACAAACAAGAGTTGATTTCAGAAGCAATTAAAGCAAGGGACTTTGC     50

BSNT_03772___     51 ATATACGCCGTATTCCAAATTCCAAGTAGGAGCCGCTCTTCTTACCAAGG    100
                     ||||...||.|||||.||||||.||||.||.||.||..|.||..|.||.|
BPUM_2263___c     51 ATATGTACCCTATTCAAAATTCAAAGTCGGTGCAGCATTACTGTCGAATG    100

BSNT_03772___    101 ATGGAAAAGTGTACAGAGGCTGCAACATTGAGAACGCGGCATACAGCATG    150
                     ||||||.||||||..|.||||||||||||||.||.||.|||||..|.|||
BPUM_2263___c    101 ATGGAACAGTGTATGGCGGCTGCAACATTGAAAATGCAGCATATGGTATG    150

BSNT_03772___    151 TGCAATTGCGCCGAGCGTACTGCTTTATTTAAAGCTGTTTCTGAAGGGGA    200
                     ||.|||||.||.||..|.||.||..|.||||||||...|||.||| ||.|
BPUM_2263___c    151 TGTAATTGTGCGGAAAGAACAGCACTTTTTAAAGCCTATTCAGAA-GGCA    199

BSNT_03772___    201 T-ACAGAGTTTCAGATGCTGGCCGTTGCGGCTGACACCCCTGGACCG---    246
                     | |||..||||||.|||||.||.||.|.||||||.||    .|||||   
BPUM_2263___c    200 TCACATCGTTTCAAATGCTAGCAGTAGTGGCTGATAC----AGACCGTCC    245

BSNT_03772___    247 -GTATCTCCGTGCGGAGCCTGCCGCCAGGTGATTTCTGAGCTTTGCACAA    295
                      ||.||.||||||||.||.|||.|.|||||.|||||.|||||.||..||.
BPUM_2263___c    246 TGTTTCGCCGTGCGGGGCATGCAGACAGGTCATTTCAGAGCTATGTGCAC    295

BSNT_03772___    296 AAGAC------GTTATTGTCGTACTAACTAATTTACAAGGACAAATAAAA    339
                     ..|||      ||.|||      |||||.||.|||.|||||||||||.|.
BPUM_2263___c    296 CTGACATGCCAGTGATT------CTAACGAACTTAAAAGGACAAATATAC    339

BSNT_03772___    340 GAAATGACTGTGGAAGATTTATTGCCAGGCGCATTTTCATCGGAGGATTT    389
                     ||||..||.||..|.||..||||||||||||||||||||.||||||||||
BPUM_2263___c    340 GAAACAACAGTAAATGAACTATTGCCAGGCGCATTTTCACCGGAGGATTT    389

BSNT_03772___    390 ACATGACGAACGAAAGCTTTAA    411
                     |.|||||.||            
BPUM_2263___c    390 AAATGACTAA------------    399


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