Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03770 and BPUM_2261

See Amino acid alignment / Visit BSNT_03770 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:18
# Commandline: needle
#    -asequence dna-align/BSNT_03770.1.24716.seq
#    -bsequence dna-align/BPUM_2261.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03770-BPUM_2261.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03770-BPUM_2261.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03770
# 2: BPUM_2261
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 144
# Identity:     123/144 (85.4%)
# Similarity:   123/144 (85.4%)
# Gaps:           0/144 ( 0.0%)
# Score: 531.0
# 
#
#=======================================

BSNT_03770         1 GTGTTGAATTTTACCTGGAACGTATTTTCTCAAACAGGAAATGTTGATAC     50
                     .|||||||||||||.||||||||||||||.||||||||||..|||||.||
BPUM_2261          1 ATGTTGAATTTTACATGGAACGTATTTTCACAAACAGGAAGCGTTGACAC     50

BSNT_03770        51 GTATCTTCTTTTTAAAGAACTGGAAAAAGAGAACATGGAAAGACCCGAAG    100
                     ||||||.|||||.|||||..|.|||||.||||||.|||||||||||||.|
BPUM_2261         51 GTATCTGCTTTTCAAAGAGTTAGAAAAGGAGAACCTGGAAAGACCCGATG    100

BSNT_03770       101 AACTAGAAGATGAGCTAGCCCGATTTGATTATCCAATTTTATAA    144
                     .|||.|||||.|||.||||.||||||||||.||||||.||||||
BPUM_2261        101 TACTTGAAGAAGAGATAGCACGATTTGATTTTCCAATCTTATAA    144


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