Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03768 and BPUM_2259
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:18
# Commandline: needle
# -asequence dna-align/BSNT_03768___glyQ.1.24716.seq
# -bsequence dna-align/BPUM_2259___glyQ.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03768___glyQ-BPUM_2259___glyQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03768___glyQ-BPUM_2259___glyQ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03768___glyQ
# 2: BPUM_2259___glyQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 939
# Identity: 705/939 (75.1%)
# Similarity: 705/939 (75.1%)
# Gaps: 57/939 ( 6.1%)
# Score: 2725.5
#
#
#=======================================
BSNT_03768___ 1 TTGCTGCCGCAGTCAACTTATGAAAGAAAAGTGGAGGTGCTTGAAATGAA 50
.||||
BPUM_2259___g 1 ---------------------------------------------TTGAA 5
BSNT_03768___ 51 TATTCAAGACATGATTCTAACCTTGCAAAAGCATTGGTCCAGTCAGGGCT 100
||||||||||||||||.|.||..||||||||||||||||.|.|.|.||||
BPUM_2259___g 6 TATTCAAGACATGATTTTGACGCTGCAAAAGCATTGGTCAAATGAAGGCT 55
BSNT_03768___ 101 GTGTGCTTATGCAGGCTTACGATGTAGAAAAAGGAGCCGGCACGATGAGC 150
|.||..|.||||||||.||.||...|||||||||.|||||.||||||||.
BPUM_2259___g 56 GCGTATTAATGCAGGCGTATGACACAGAAAAAGGTGCCGGAACGATGAGT 105
BSNT_03768___ 151 CCGTATACATTTTTGCGCAGTATCGGCCCTGAGCCGTGGAAAGTGGCTTA 200
||.||.||.||..|..|.||.||.|||||.|||||||||||.||.||.||
BPUM_2259___g 106 CCATACACGTTCCTCAGAAGCATTGGCCCAGAGCCGTGGAAGGTAGCGTA 155
BSNT_03768___ 201 TGTAGAGCCTTCCAGACGTCCTGCAGACGGCCGCTACGGGGAGAACCCGA 250
|||.||||||||.|||||.||.||.||.|||.|.||.||.||.|||||.|
BPUM_2259___g 156 TGTTGAGCCTTCAAGACGCCCAGCTGATGGCAGATATGGAGAAAACCCAA 205
BSNT_03768___ 251 ACAGACTGTATCAGCATCATCAGTTCCAGGTCATTATTAAACCGTCTCCT 300
|.|||.||||||||||||||||.|||||.||.||.|||||.|||||.|||
BPUM_2259___g 206 ATAGATTGTATCAGCATCATCAATTCCAAGTGATCATTAAGCCGTCACCT 255
BSNT_03768___ 301 GATAACATTCAAGAACTGTATTTAGATTCCTTGCGTGCTCTTGGAATTGA 350
||.||.|||||||||||||||.|.||.||.|||...||.|||||.|||||
BPUM_2259___g 256 GACAATATTCAAGAACTGTATCTTGAATCATTGAAAGCGCTTGGTATTGA 305
BSNT_03768___ 351 TCCGCTTGAGCACGATATTCGCTTTGTTGAAGACAACTGGGAGAATCCGT 400
.|||||..|.||.||||||||.|||||.||||||||||||||.||.||.|
BPUM_2259___g 306 CCCGCTGAAACATGATATTCGTTTTGTCGAAGACAACTGGGAAAACCCAT 355
BSNT_03768___ 401 CTTTAGGCTGCGCGGGTCTAGGCTGGGAAGTTTGGCTTGACGGAATGGAA 450
||.|.|||||.||.||.||.|||||||||||.||||||||.|||||||||
BPUM_2259___g 356 CTCTTGGCTGTGCAGGACTTGGCTGGGAAGTATGGCTTGATGGAATGGAA 405
BSNT_03768___ 451 ATAACACAATTTACGTATTTCCAGCAGGTCGGGGGATTAGAGTGTAAACC 500
||.||.|||||.||.|||||||||||.|||||.||.||.||.|||||.||
BPUM_2259___g 406 ATCACCCAATTCACATATTTCCAGCAAGTCGGCGGTTTGGAATGTAAGCC 455
BSNT_03768___ 501 CGTTTCTGTAGAGATTACGTATGGAATAGAGCGTCTCGCGTCTTATATCC 550
.|||||.||.||.||.||.||.||.||.||.|||||.||.||.||.||.|
BPUM_2259___g 456 TGTTTCCGTTGAAATCACATACGGTATTGAACGTCTTGCTTCCTACATTC 505
BSNT_03768___ 551 AGGATAAAGAAAACGTGTTTGA-CTTGGAATGGACGTCA-GGGTTTACAG 598
||||.||||||||.||.||.|| ||| |||||||| |.| ||.||.||.|
BPUM_2259___g 506 AGGACAAAGAAAATGTCTTCGATCTT-GAATGGAC-TGACGGATTCACGG 553
BSNT_03768___ 599 TAAAAGATTTATTCATGATGGCTGAATATGAGCATTCTGTTTATACGTTT 648
|.|.||||||||||.|.|||||||||||||||||.|||||||||||.|||
BPUM_2259___g 554 TCAGAGATTTATTCCTAATGGCTGAATATGAGCACTCTGTTTATACATTT 603
BSNT_03768___ 649 GAAACATC--AGACGTCGATATGTTGTTCCAATTGTTCAGCACATATGAA 696
|||||||| |.|| .||.||||||||..|..|.||.|..||.|||||.
BPUM_2259___g 604 GAAACATCTAATAC--TGACATGTTGTTTGAGCTATTTACGACCTATGAG 651
BSNT_03768___ 697 AAAGAAGCGATCA-AG-CAAATGGATAACGGACTTGTTCATCCAGCGTAT 744
||.|||||| || || ||||||||.||.|||||||||||.|||||.||.
BPUM_2259___g 652 AAGGAAGCG--CATAGCCAAATGGACAAAGGACTTGTTCACCCAGCATAC 699
BSNT_03768___ 745 GACTATGTGCTGAAATGCTCGCACACCTTCAATCTGCTTGACGCCAAAGG 794
||.||||||||.||||||||.||.||.||.||.|||||.||.||.||.||
BPUM_2259___g 700 GATTATGTGCTCAAATGCTCTCATACGTTTAACCTGCTCGATGCAAAGGG 749
BSNT_03768___ 795 TGCGATCTCTGTTACCGAGCGGACGGGCTATATCGCAAGAGTGCGGAATT 844
.||.||.||||||||.|||||.||.||.|||||||.|||||||||..|.|
BPUM_2259___g 750 CGCAATTTCTGTTACTGAGCGAACTGGATATATCGGAAGAGTGCGCCAGT 799
BSNT_03768___ 845 TAGCTAGAAAAGTAGCAAAAACCTATTATGAGGAACGAGAAAAACTAGGG 894
||||.|||||||||||.||||||||||||||.||||||||||||.|.||.
BPUM_2259___g 800 TAGCAAGAAAAGTAGCCAAAACCTATTATGAAGAACGAGAAAAATTGGGA 849
BSNT_03768___ 895 TTCCCAATGCTTAAAGGGGAGGGTTCTTCTCATGAGTAA 933
|||||.|||||.||||.|||||...||||||||||.|||
BPUM_2259___g 850 TTCCCTATGCTAAAAGAGGAGGCGGCTTCTCATGAATAA 888
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