Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03765 and BPUM_2257
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:18
# Commandline: needle
# -asequence dna-align/BSNT_03765___yqzB.1.24716.seq
# -bsequence dna-align/BPUM_2257___yqzB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03765___yqzB-BPUM_2257___yqzB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03765___yqzB-BPUM_2257___yqzB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03765___yqzB
# 2: BPUM_2257___yqzB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 749
# Identity: 497/749 (66.4%)
# Similarity: 497/749 (66.4%)
# Gaps: 121/749 (16.2%)
# Score: 1893.0
#
#
#=======================================
BSNT_03765___ 0 -------------------------------------------------- 0
BPUM_2257___y 1 GTGGATTTTTGTCTCATTCGGACAAAGATGCGCTATAATATGATGAGTTA 50
BSNT_03765___ 1 -------------------------------------------------G 1
|
BPUM_2257___y 51 TGAAAATGATATACATAAAGTAAAGATTCGCTCTCTCTATTTAAAGGTGG 100
BSNT_03765___ 2 TGAGTACGATCGAACTAAATAAACGGCAAGAACATATTTTGCAGATTGTA 51
|||||||.|||||..||||||||||||||||.||.|||||.||||||||.
BPUM_2257___y 101 TGAGTACAATCGAGTTAAATAAACGGCAAGAGCAGATTTTACAGATTGTC 150
BSNT_03765___ 52 AAAGAAAACGGGCCGATTACAGGGGAGCATATTGCAGAAAAGCTGAACCT 101
|||||.||.||.|||||.||.||.||||||||.||.||....||||||.|
BPUM_2257___y 151 AAAGAGAATGGTCCGATCACTGGAGAGCATATCGCCGATCGTCTGAACTT 200
BSNT_03765___ 102 AACCAGGGCGACATTGCGCCCGGATTTAGCCATACTCACCATGTCAGGAT 151
|||.||||||||..|..|.|||||||||||||||.|.||.||||||||.|
BPUM_2257___y 201 AACGAGGGCGACCCTCAGACCGGATTTAGCCATATTAACGATGTCAGGCT 250
BSNT_03765___ 152 TCCTCGAGGCGCGCCCGAGAGTCGGTTATTTCTATACGGGAAAAACCGGC 201
|..|.||.||..|.||.||.||||||||.||.|..||.||||||||.|||
BPUM_2257___y 251 TTTTAGAAGCAAGACCAAGGGTCGGTTACTTTTTCACAGGAAAAACAGGC 300
BSNT_03765___ 202 ACACAGCTTTTGGCAGATAAACTCAAAAAGCTTCAGGTGAAAGACTTTCA 251
||.||||||||.||||||||.||.|||||.|||||.||||||||.|||||
BPUM_2257___y 301 ACGCAGCTTTTAGCAGATAAGCTGAAAAAACTTCAAGTGAAAGATTTTCA 350
BSNT_03765___ 252 ATCTATCCCCGTAGTGATTCACGAAAACGTTTCTGTGTACGATGCGATTT 301
|||.||.||.||.|||||.||.||.||.|||||.||.||.||||||||||
BPUM_2257___y 351 ATCCATTCCAGTGGTGATACATGAGAATGTTTCGGTTTATGATGCGATTT 400
BSNT_03765___ 302 GCACCATGTTTTTAGAAGATGTAGGTACTCTGTTTGTGGTGGACCGCGAT 351
|.||.|||||||||||.|||||.||.||..|.||.||.||||| ||||
BPUM_2257___y 401 GTACGATGTTTTTAGAGGATGTGGGCACATTATTCGTTGTGGA---CGAT 447
BSNT_03765___ 352 ---GCTGTTTTAGTCGGGGTGCTTTCACGAAAAGACTTGCTCAGAGCGAG 398
.||.|||||...||.|||.|.|||.|.||.|||.|.||..|.||.||
BPUM_2257___y 448 CACTCTATTTTAACAGGCGTGTTGTCAAGGAAGGACCTTCTTCGCGCAAG 497
BSNT_03765___ 399 CATTGGCCAGCAGGAGCTTACATCGGTCCCTGTTCACATCATCATGACAA 448
.|||||..|.|||||||||.||||..|||||||.||.||.||.|||||||
BPUM_2257___y 498 TATTGGAAAACAGGAGCTTCCATCAATCCCTGTCCATATTATTATGACAA 547
BSNT_03765___ 449 GGATGCCGAACATTACGGTGTGCAGACGCGAGG--------ATTATGTGA 490
|.|||||||||||.||.||.||| |||.||| |||||| ||
BPUM_2257___y 548 GAATGCCGAACATCACCGTTTGC---CGCAAGGAAGATTTCATTATG-GA 593
BSNT_03765___ 491 TGGACATTGCAAAGCACTTAATAGAAAAACAAATTGATGCACTGCCTGTC 540
|| |.||.||||||||.||.|||||.||.||.||||||||.|||||.
BPUM_2257___y 594 TG----TGGCTAAGCACTTGATTGAAAAGCAGATAGATGCACTTCCTGTT 639
BSNT_03765___ 541 ATCAAAGACACCGATAAAGGCTTTGAAGTGATCGGCAGAGTGACAAAAAC 590
||.|||||.||.||||||||||||||||||.||||||||.|.||||||||
BPUM_2257___y 640 ATAAAAGATACGGATAAAGGCTTTGAAGTGGTCGGCAGAATTACAAAAAC 689
BSNT_03765___ 591 AAATATGACAAAAATACTTGTCAGTTTATCTGAAAATGAAATCTTATAA 639
|||.|||||.|||||||||||.||.|||||.||.||.|||||..|.|||
BPUM_2257___y 690 AAACATGACGAAAATACTTGTTAGCTTATCAGAGAACGAAATAATCTAA 738
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