Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03745 and BPUM_2245

See Amino acid alignment / Visit BSNT_03745 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:16
# Commandline: needle
#    -asequence dna-align/BSNT_03745___yqfT.1.24716.seq
#    -bsequence dna-align/BPUM_2245___yqfT.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03745___yqfT-BPUM_2245___yqfT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03745___yqfT-BPUM_2245___yqfT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03745___yqfT
# 2: BPUM_2245___yqfT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 264
# Identity:     179/264 (67.8%)
# Similarity:   179/264 (67.8%)
# Gaps:          18/264 ( 6.8%)
# Score: 570.5
# 
#
#=======================================

BSNT_03745___      1 ATGATTTTATTTCAAAGAATTATTTTACAGCGGCTTAATCAGGCTACTGC     50
                     .||||||||.|.||||.||||.|..|.||||||||.||||||...||.||
BPUM_2245___y      1 TTGATTTTAATCCAAAAAATTGTCCTGCAGCGGCTCAATCAGATCACAGC     50

BSNT_03745___     51 TGATGATTTGCTGAAGTACTCAAAACAATACGGAATCAGCTTAAC----A     96
                     ..|||||.||.|.|.|||..|.||.||.||.||..||||.|||||    |
BPUM_2245___y     51 AAATGATCTGTTAAGGTATGCGAAGCAGTATGGTGTCAGTTTAACGTCAA    100

BSNT_03745___     97 AGATCGCAGGCAGTTGAAGTAGCGAACCTGTTATACGGGAAAAATGTAAA    146
                     |    .||.||.|..||.||.||.||.|||.|..|.||||||||..|.||
BPUM_2245___y    101 A----CCAAGCTGCCGAGGTGGCCAAACTGATGAATGGGAAAAACATCAA    146

BSNT_03745___    147 CATCTTTAATG----AGAGTG-AACGAATGCGGCTGCTGAAACAAGTAGA    191
                     .||.|||||||    ||||.| |||     |||||.||.||.||.||.||
BPUM_2245___y    147 TATTTTTAATGATGCAGAGCGTAAC-----CGGCTTCTTAAGCAGGTGGA    191

BSNT_03745___    192 GACGATTACATCGAAAGAAACAGCTCAAACAGTTAATGAACTATTCAAAC    241
                     ..|||||||.||.|||.|.||||||||.||.||.|||||.||.||.||.|
BPUM_2245___y    192 AGCGATTACGTCTAAACAGACAGCTCAGACTGTCAATGATCTGTTTAACC    241

BSNT_03745___    242 AATTTACAAGCTAA    255
                     |.||||||||.|||
BPUM_2245___y    242 AGTTTACAAGTTAA    255


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