Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03744 and BPUM_2244
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:16
# Commandline: needle
# -asequence dna-align/BSNT_03744___yqfU.1.24716.seq
# -bsequence dna-align/BPUM_2244___yqfU.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03744___yqfU-BPUM_2244___yqfU.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03744___yqfU-BPUM_2244___yqfU.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03744___yqfU
# 2: BPUM_2244___yqfU
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 895
# Identity: 685/895 (76.5%)
# Similarity: 685/895 (76.5%)
# Gaps: 29/895 ( 3.2%)
# Score: 2582.0
#
#
#=======================================
BSNT_03744___ 1 ATGACCCCAACAAAACAACATAAGAAA-GAAACATTTACCCATTTTATTT 49
||| .|||..|||||.||| ||||| |||.||.|..|.||||||||||
BPUM_2244___y 1 ATG---GCAAATAAACAGCAT-AGAAAGGAATCAGTGCCTCATTTTATTT 46
BSNT_03744___ 50 TCAGGGTCTTTATGATTCTGGTAGGAGCTGCATCTGCGGCTGTAAGTATT 99
|.||..|.|||.|||||||.|||||||||.|||..||.||.||.||.|||
BPUM_2244___y 47 TGAGAATTTTTCTGATTCTAGTAGGAGCTACATGCGCAGCGGTTAGCATT 96
BSNT_03744___ 100 GAATTATTTTTAATCCCCAATGATTTTATTGATGGCGGGATTATCGGTGT 149
||||||||||||.|.||.||..||.||||||||||.||.||.|||||..|
BPUM_2244___y 97 GAATTATTTTTAGTGCCAAACAATATTATTGATGGAGGCATCATCGGCAT 146
BSNT_03744___ 150 ATCACTTATTTTAGACCACCTCTTTATGTCA---AACCCCTTTCTCAATT 196
.||.||||||||.||..|.||||||| || |||||.||..||||||
BPUM_2244___y 147 TTCGCTTATTTTGGATTATCTCTTTA---CAGATAACCCATTCATCAATT 193
BSNT_03744___ 197 T-----CGCTTTATTCGTTGTCATATTAAATATTCCTTTTATGATCTTCG 241
| ||.|| ||||||||.|||||||||||.||||||||.|..|
BPUM_2244___y 194 TTGCGACGATT-----GTTGTCATTTTAAATATTCCATTTATGATATCAG 238
BSNT_03744___ 242 GATATAAATATATCGGTAAGACCTTTCTAGTCTCTACGTTTATAGGGATT 291
||||.|||.||||.||.||.||.|||||..|.||.||..|.||.||.|||
BPUM_2244___y 239 GATACAAACATATTGGAAAAACGTTTCTTATTTCCACTGTGATTGGAATT 288
BSNT_03744___ 292 GTCGGACTT-GCCGTTATTGAATCCTCACTTCACCATGTAGAAGCCATTA 340
|||.| ||| |||||.||.|||||.|||||.||.||||||||.||..|||
BPUM_2244___y 289 GTCAG-CTTAGCCGTCATAGAATCTTCACTCCATCATGTAGAGGCATTTA 337
BSNT_03744___ 341 CAACCCAGCCTATTTTGGCTACTGTGTTCGGAGGTCTTTTACTCGGCTTT 390
|.||.|||||.||.||.||||||||.||.||.||.||.|||||.||.|||
BPUM_2244___y 338 CCACTCAGCCAATCTTAGCTACTGTATTTGGCGGGCTATTACTTGGTTTT 387
BSNT_03744___ 391 GGCGTCGGGCTTGTTATTCGAAACGGAGGTTCAATGGATGGTACAGAAAT 440
||.||.||.|||||.||.||.||.|||||.|||||||||||.||.||.||
BPUM_2244___y 388 GGTGTTGGACTTGTCATCCGTAATGGAGGCTCAATGGATGGAACGGAGAT 437
BSNT_03744___ 441 TCTCGGTATTTTGCTGACCAAAAAACTCCCGTTTTCTGTAGGTGAGTTCG 490
..|.||.|||.||||.||.||||||.|.||.|||||.||.||||||||.|
BPUM_2244___y 438 CTTAGGCATTCTGCTAACGAAAAAAATTCCTTTTTCCGTCGGTGAGTTTG 487
BSNT_03744___ 491 TTATGTTCATCAATGTGTTCATTTTCATTTGGGCAGTTTTTGTGTTCGGT 540
|.|||.||.||||||||||||||||.||||||||||..|||||.|||||.
BPUM_2244___y 488 TCATGATCGTCAATGTGTTCATTTTTATTTGGGCAGGCTTTGTCTTCGGA 537
BSNT_03744___ 541 CCTGAGCAAGCGATGTACTCATTCATGACTTATTATATTGCGATGAAAAC 590
||.|||||.||.|||||.||..|||||||.||||||.|.||.||||||||
BPUM_2244___y 538 CCAGAGCAGGCTATGTATTCTGTCATGACATATTATTTGGCAATGAAAAC 587
BSNT_03744___ 591 GATTGATGCTGTGATCCAAGGGCTTGATGAAACAAAAGCTGTCATTATTG 640
.|||||||||||.||.|||||.||||||||||||||||||||||||||.|
BPUM_2244___y 588 AATTGATGCTGTCATTCAAGGACTTGATGAAACAAAAGCTGTCATTATCG 637
BSNT_03744___ 641 TGTCTGAGCAGTATGATGAGATTTCCGACGCGATTTTGCACCGTCTCGGT 690
|.||.||..|.||||||||.|||||.||.||||||.|.||.||.||.|||
BPUM_2244___y 638 TATCAGATTATTATGATGAAATTTCAGATGCGATTCTTCATCGACTTGGT 687
BSNT_03744___ 691 CGGGGCACAACGAAGCTGAAGGGGAAAGGCGGATATACGGACGAAGAAAA 740
.||||.||.||.|||.|||..|||||||||||.|||||.||.||||||||
BPUM_2244___y 688 AGGGGAACGACAAAGTTGAGAGGGAAAGGCGGTTATACAGATGAAGAAAA 737
BSNT_03744___ 741 AGACGTAATTTACGCGGTTGTCACAAGGCTGGAAGTGACAAAGCTCAAAT 790
.||.||.||.|||||.|||||||||||.||.|||.|.||||||||.||||
BPUM_2244___y 738 GGATGTCATCTACGCCGTTGTCACAAGACTTGAAATCACAAAGCTAAAAT 787
BSNT_03744___ 791 CGATCGTGTTTGAAGTTGA---TCAAAATGCATTCATAACAATTATGAAT 837
|.||.||.||||||.|||| |||| |||||.||.|||||||||.||
BPUM_2244___y 788 CCATTGTATTTGAAATTGATAGTCAA---GCATTTATTACAATTATGGAT 834
BSNT_03744___ 838 ACTCATGAAACGAGAGGCGGAAAATTCAAAAACGCAATCCACTAG 882
||.||||||||.|.||||||.||.|||||||..||.||.||.|||
BPUM_2244___y 835 ACGCATGAAACAAAAGGCGGTAAGTTCAAAACAGCCATTCATTAG 879
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