Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03742 and BPUM_2241
See
Amino acid alignment /
Visit
BSNT_03742 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:16
# Commandline: needle
# -asequence dna-align/BSNT_03742___zur.1.24716.seq
# -bsequence dna-align/BPUM_2241___zur.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03742___zur-BPUM_2241___zur.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03742___zur-BPUM_2241___zur.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03742___zur
# 2: BPUM_2241___zur
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 451
# Identity: 325/451 (72.1%)
# Similarity: 325/451 (72.1%)
# Gaps: 35/451 ( 7.8%)
# Score: 1139.0
#
#
#=======================================
BSNT_03742___ 1 ATGAACGTACAAGAAGCGCTGAACCTACTAAAAGAAAACGGATATAAATA 50
||||||||||||||||||||..|..||.||||||||||.||.||.||.||
BPUM_2241___z 1 ATGAACGTACAAGAAGCGCTTGATTTATTAAAAGAAAAAGGCTACAAGTA 50
BSNT_03742___ 51 TACAAACAAACGGGAGGATATGCTGCAGCTTTTTGCTGATTCAGACAGAT 100
|||||.||||||.||.||.|||||.||.||.|||.|||||||.||.|.||
BPUM_2241___z 51 TACAAGCAAACGTGAAGACATGCTTCAACTGTTTTCTGATTCTGATAAAT 100
BSNT_03742___ 101 ATCTTACCGCTAAAAACGTACTGTCTGCACTGAATGATGATTATCCAGG- 149
||.|.||.||||||||.||.|||.|.|||||.|.|||.||.||||||||
BPUM_2241___z 101 ATTTGACTGCTAAAAATGTGCTGACGGCACTAAGTGAAGACTATCCAGGT 150
BSNT_03742___ 150 CTTAAGCTTTGATACAATCTACAGAAATCTTTCTTTATATGAAGAACTT- 198
||| |||||||||||.||.||..||||.||.||..||||||||| ||||
BPUM_2241___z 151 CTT-AGCTTTGATACGATTTATCGAAACCTGTCACTATATGAAG-ACTTA 198
BSNT_03742___ 199 GGGATTTTGGAAACAACTGAGCTGTCCGGTGAAAAGCTCTTCCGATTTAA 248
||.||.||.||||||||.||..||||.||.||.|||||.||.||.|||||
BPUM_2241___z 199 GGTATATTAGAAACAACGGAATTGTCAGGAGAGAAGCTTTTTCGTTTTAA 248
BSNT_03742___ 249 GTGTTCATTCACCCATCACCACCATCATTTTATTTGTCTTGCCTGCGGCA 298
.||.||.||..|.||||||||.|||||||||||.|||||.||.||.||.|
BPUM_2241___z 249 ATGCTCCTTTTCTCATCACCATCATCATTTTATATGTCTCGCATGTGGTA 298
BSNT_03742___ 299 AAACAAAGGAAATTGAATCATGTCCGATGGACAAGCTTTGTGAT------ 342
||||||||||.|||||..|.||.||.|||||||| ||
BPUM_2241___z 299 AAACAAAGGAGATTGATGCCTGCCCTATGGACAA--------ATTAGACG 340
BSNT_03742___ 343 --GATTTGGATGGCTATCAGGTCAGCGGGCATAAATTTGAGATTTATGGC 390
|||.|.||.|..|||||..|.|||||.||||||||.||.||.||.||.
BPUM_2241___z 341 CCGATCTAGAGGATTATCACATTAGCGGACATAAATTCGAAATATACGGA 390
BSNT_03742___ 391 ACATGCCCTGATTGTACAGCGGAAAACC-AAGAAA--ACACTACTGCGTA 437
||.||.|||..|| ||| |||| |||.|| .|| |.|.||
BPUM_2241___z 391 ACGTGTCCTTCTT-----GCG---AACCGAAGGAAGTTCA----TTCATA 428
BSNT_03742___ 438 A 438
|
BPUM_2241___z 429 A 429
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.