Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03734 and BPUM_2230
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:16
# Commandline: needle
# -asequence dna-align/BSNT_03734___sodA.1.24716.seq
# -bsequence dna-align/BPUM_2230___sodA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03734___sodA-BPUM_2230___sodA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03734___sodA-BPUM_2230___sodA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03734___sodA
# 2: BPUM_2230___sodA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 622
# Identity: 508/622 (81.7%)
# Similarity: 508/622 (81.7%)
# Gaps: 26/622 ( 4.2%)
# Score: 2089.5
#
#
#=======================================
BSNT_03734___ 1 ATGGCTTACGAACTTCCAGAATTACCTTATGCGTACGATGCTTTAGAACC 50
|||||||...||||||||||||||||.|||||.||||||||.||||||||
BPUM_2230___s 1 ATGGCTTTTAAACTTCCAGAATTACCATATGCTTACGATGCATTAGAACC 50
BSNT_03734___ 51 GCATATCGACAAGGAAACTATGACTATTCACCATACGAAACACCACAACA 100
.|||||||||||||||||.|||||.||||||||.||.|||||||||||||
BPUM_2230___s 51 ACATATCGACAAGGAAACAATGACGATTCACCACACAAAACACCACAACA 100
BSNT_03734___ 101 CATACGTGACAAATTTAAACAAAGCGGTTGAAG--GAAACACTGCTCTTG 148
|||||||.|||||.|||||||||||..|.|||| |.|.|| |||||||
BPUM_2230___s 101 CATACGTAACAAACTTAAACAAAGCAATCGAAGGTGTATCA--GCTCTTG 148
BSNT_03734___ 149 CCAACA--AATCAGTTGAAGAGCTTGTTGCAGATCTTGATTCTGTTCCTG 196
||.| |||||.|.||||||||.||.||..|.||..|.|||||.||||
BPUM_2230___s 149 --AAGATCAATCAATCGAAGAGCTAGTGGCTAACCTAAACTCTGTGCCTG 196
BSNT_03734___ 197 AAAACATCCGCACTGCGGTCCGCAACAACGGCGGCGGACACGCGAACCAC 246
|.||||||||.||.||.||.||.|||||.|||||.|||||.||.||||||
BPUM_2230___s 197 AGAACATCCGTACAGCTGTACGTAACAATGGCGGAGGACATGCTAACCAC 246
BSNT_03734___ 247 AAATTATTCTGGACACTTTTATCTCCAAACGGCGGAGGCGAACCGACTGG 296
..||||||||||||.|||.|.||.||||||||.||.||||.|||.|||||
BPUM_2230___s 247 TCATTATTCTGGACGCTTCTTTCACCAAACGGTGGCGGCGCACCAACTGG 296
BSNT_03734___ 297 CGCGCTTGCTGAAGAGATCAGCAGT-------GTATTTGGAAGCTTTGAC 339
.|..||||| |||| |||.| |.|||.||..|.|||||.
BPUM_2230___s 297 TGAACTTGC-----AGAT--GCAATCGAAAAAGAATTAGGCGGATTTGAA 339
BSNT_03734___ 340 AAATTCAAAGAGCAATTCGCAGCAGCAGCAGCTGGACGCTTCGGTTCTGG 389
|||||||||....|.|||||.||||||||.||.||||||||.||||||||
BPUM_2230___s 340 AAATTCAAATCTGATTTCGCTGCAGCAGCTGCAGGACGCTTTGGTTCTGG 389
BSNT_03734___ 390 CTGGGCATGGCTTGTTGTGAACAACGGGAAACTTGAAATCACAAGCACGC 439
.|||||||||||||||||||||||.||.||||||||||||||||||||||
BPUM_2230___s 390 TTGGGCATGGCTTGTTGTGAACAATGGCAAACTTGAAATCACAAGCACGC 439
BSNT_03734___ 440 CAAACCAAGATTCTCCGCTTT--CAGAAGGCAAAACGCCTATCTTAGGTC 487
||||||||||||||| |||| |.|||||.|||||.||.||..||||.|
BPUM_2230___s 440 CAAACCAAGATTCTC--CTTTAACTGAAGGAAAAACACCAATTCTAGGAC 487
BSNT_03734___ 488 TTGACGTTTGGGAGCATGCTTACTACCTTAACTATCAAAACCGCCGTCCT 537
||||||||||||||||||||||||||||.|||||.||||||||.||||||
BPUM_2230___s 488 TTGACGTTTGGGAGCATGCTTACTACCTAAACTACCAAAACCGTCGTCCT 537
BSNT_03734___ 538 GATTACATTTCAGCTTTCTGGAATGTTGTAAACTGGGACGAAGTGGCTCG 587
||||||||||||||.||||||||||||||.||||||||.|||||||||||
BPUM_2230___s 538 GATTACATTTCAGCATTCTGGAATGTTGTGAACTGGGATGAAGTGGCTCG 587
BSNT_03734___ 588 TCTATACAGCGAAGCAAAATAA 609
.||.|||||||||||.||||||
BPUM_2230___s 588 CCTTTACAGCGAAGCTAAATAA 609
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