Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03702 and BPUM_2210
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:14
# Commandline: needle
# -asequence dna-align/BSNT_03702___yqgW.1.24716.seq
# -bsequence dna-align/BPUM_2210___yqgW.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03702___yqgW-BPUM_2210___yqgW.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03702___yqgW-BPUM_2210___yqgW.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03702___yqgW
# 2: BPUM_2210___yqgW
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 207
# Identity: 125/207 (60.4%)
# Similarity: 125/207 (60.4%)
# Gaps: 42/207 (20.3%)
# Score: 399.0
#
#
#=======================================
BSNT_03702___ 1 ------------------------ATGTTACTTGTCGTGATTTTCGGCCT 26
|||.|.||.|||.|.|||||.||.||
BPUM_2210___y 1 TTGATGACAAAGGGGGACTTTCACATGATGCTCGTCATTATTTTTGGTCT 50
BSNT_03702___ 27 TGTCGCTCTTTTCGCTTTA-TGGGGAGTCTTGCGTTCTGTTAGAAATAAA 75
.|||.|..||||.|||..| |.|||| |||..|||||..| |||.|||
BPUM_2210___y 51 AGTCACGATTTTAGCTGCACTCGGGA-TCTATCGTTCACT---AAAAAAA 96
BSNT_03702___ 76 ---AATATACTCG-----GGTTTTTATTAGCCGGTGCCACCTTATTTGTC 117
|||.||||.| |.|||| ||.||.||.||.||.||.||.
BPUM_2210___y 97 GTGAATGTACTTGCCATCGCTTTT-----GCTGGCGCAACATTTTTGGTT 141
BSNT_03702___ 118 TTTGGATGGTTTACCGTGATGACCGTAATAAACAGCGGGTATCCAACCGC 167
|||||.||||||||.||.||||||.|.||..|.|||||.||||||||.||
BPUM_2210___y 142 TTTGGCTGGTTTACTGTCATGACCATCATCTATAGCGGTTATCCAACTGC 191
BSNT_03702___ 168 ACATTAA 174
|||||||
BPUM_2210___y 192 ACATTAA 198
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