Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03698 and BPUM_2207
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:13
# Commandline: needle
# -asequence dna-align/BSNT_03698___yqgZ.1.24716.seq
# -bsequence dna-align/BPUM_2207___yqgZ.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03698___yqgZ-BPUM_2207___yqgZ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03698___yqgZ-BPUM_2207___yqgZ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03698___yqgZ
# 2: BPUM_2207___yqgZ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 384
# Identity: 286/384 (74.5%)
# Similarity: 286/384 (74.5%)
# Gaps: 6/384 ( 1.6%)
# Score: 1030.5
#
#
#=======================================
BSNT_03698___ 1 ATGGAACAACAATTAACTTTTTACTCATATCCAAGCTGCACGTCATGCCG 50
|| ||...||| |.||||||||.|||||.||.|||||||||||.|||||
BPUM_2207___y 1 AT-GAGTGACA--TTACTTTTTATTCATACCCGAGCTGCACGTCTTGCCG 47
BSNT_03698___ 51 AAAAACAAAACATTGGCTTAAAGCACATCAAATTGAATTTAACGAACGGC 100
.|||||||||||||||||.||.||..||||||||||.|||||.||.||.|
BPUM_2207___y 48 TAAAACAAAACATTGGCTAAAGGCGAATCAAATTGATTTTAAAGAGCGTC 97
BSNT_03698___ 101 ATTTATTCAGAGAAACCCCGACAAGAGAAGAATTAAAGTACATTTTATCG 150
|..|.|||||||||||.||.||...||||||||||||..|.||..|.||.
BPUM_2207___y 98 ACCTTTTCAGAGAAACGCCAACCCTAGAAGAATTAAAAAAGATCCTTTCC 147
BSNT_03698___ 151 TTAACGACAGAAGGAATTGATGAAATTTTGGCGACAAGAAGCCAGACTTT 200
|||||.|||||||||||.|||||||||||.||.|||.||||||||.||||
BPUM_2207___y 148 TTAACAACAGAAGGAATGGATGAAATTTTAGCCACACGAAGCCAGGCTTT 197
BSNT_03698___ 201 CAAAAATTTAAATTTAAACATTGAAGAAATGACGGTAAATGAGGTGCTGG 250
.||||..|||||||||||.|||.|.||..|.|..|||||.|||||.||..
BPUM_2207___y 198 TAAAAGCTTAAATTTAAATATTAATGATTTAAAAGTAAACGAGGTTCTTC 247
BSNT_03698___ 251 AACTTTTAATCGAGAAGCCGAAGCTTTTGCGACGCCCGATTCTAGTAGAC 300
|||||.|.||.||.||.||.||.||..|.|||.|.||.|||.|..|.||.
BPUM_2207___y 248 AACTTCTCATTGAAAAACCAAAACTGCTCCGAAGACCAATTATCATTGAT 297
BSNT_03698___ 301 AACAAAAAGCTGGTGATTGGTTATAACCCGGGAGAACTGTTGAAGTTATC 350
...||.|||.||||..|.||.|||||.||.||||||||..||||.|||||
BPUM_2207___y 298 GGAAATAAGTTGGTAGTAGGGTATAATCCCGGAGAACTCATGAAATTATC 347
BSNT_03698___ 351 GAAGAAGAAAACGGTTCATCAATC---TGCATGA 381
.||.||||||.||.|||||||||| |.|.|.|
BPUM_2207___y 348 AAAAAAGAAAGCGATTCATCAATCAGTTTCCTAA 381
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