Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03676 and BPUM_2198
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:13
# Commandline: needle
# -asequence dna-align/BSNT_03676.1.24716.seq
# -bsequence dna-align/BPUM_2198___yqzE.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03676-BPUM_2198___yqzE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03676-BPUM_2198___yqzE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03676
# 2: BPUM_2198___yqzE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 203
# Identity: 128/203 (63.1%)
# Similarity: 128/203 (63.1%)
# Gaps: 31/203 (15.3%)
# Score: 391.5
#
#
#=======================================
BSNT_03676 1 GTGAAAACGAATGATTATGTTAAATATATGACGCAGCAATTTGTCAAATA 50
.|||||||.|||||.|||||.|||||||||||||||.||.|..|.|||||
BPUM_2198___y 1 TTGAAAACCAATGACTATGTAAAATATATGACGCAGGAAATCATTAAATA 50
BSNT_03676 51 TATAGATACTCCGAGAGATGAGCGAAAAGAACGAAAAGAGGTGCGGAAA- 99
|||..||||.|||.||||.||.||.||.||||..|||.|.| .||||
BPUM_2198___y 51 TATGAATACACCGCGAGACGAACGGAAGGAACATAAACAAG---AGAAAT 97
BSNT_03676 100 --GAAACAAAAACGCCTGCTTCCCAGCAGTGGTTCGGTATTTTACCCTAT 147
.||||.|||.||||...|||.||||..|..||.||..||||.||.|.|
BPUM_2198___y 98 TGCAAACGAAACCGCCATTTTCACAGCGTTTATTTGGGGTTTTGCCGTTT 147
BSNT_03676 148 GGCTTCCGGCTT---TG--GCTGAAA---------------CGGAAAAAA 177
||.|| || || |||.||| ||..||||.
BPUM_2198___y 148 GGATT-----TTCAATGATGCTAAAAAAACGTAAGCGACATCGTCAAAAG 192
BSNT_03676 178 TAA 180
|||
BPUM_2198___y 193 TAA 195
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