Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03674 and BPUM_2197
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:13
# Commandline: needle
# -asequence dna-align/BSNT_03674.1.24716.seq
# -bsequence dna-align/BPUM_2197___yqzG.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03674-BPUM_2197___yqzG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03674-BPUM_2197___yqzG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03674
# 2: BPUM_2197___yqzG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 402
# Identity: 230/402 (57.2%)
# Similarity: 230/402 (57.2%)
# Gaps: 99/402 (24.6%)
# Score: 601.0
#
#
#=======================================
BSNT_03674 1 ATGCATATCCCATTATTATTTGGTAATAATAAACAAAGAAAGGGT-GACA 49
||.| |||| | ||.|
BPUM_2197___y 1 ----------------------GTGA-AATA-------------TGGAAA 14
BSNT_03674 50 GCATGATGATCAAACAATGTG-TGATTTGTCTATCTCTTCTCGTCTTTGG 98
|| ||||.|||| || |.|.||..||||.|..|| ||.||.
BPUM_2197___y 15 GC-TGATAATCA-------TGCTCAGTTTACTATTTGGTC----CTATGA 52
BSNT_03674 99 CACCACA-GCCGCTCACGCAGA----AGAAACACCGCTTGTAACCGCCCG 143
.||.|.| |||..||..||.|| |||..|..| |||| |||
BPUM_2197___y 53 TACTAGACGCCAATCCTGCGGATGCGAGAGGCTTC-CTTG-------CCG 94
BSNT_03674 144 CCACATGTCCAAATGGGAA-----GAGATTGCTGTAAAAGAAGCAAAAAA 188
|..||..|| |||||||| | ||.||.|||||||||||.||
BPUM_2197___y 95 CAGCAGATC--AATGGGAAACACGG-----GCAGTCAAAGAAGCAAAGAA 137
BSNT_03674 189 AAGGTACCCGCTTGCACAGGTACTGTTCAAACAAAAAGTATGGGACCGTA 238
|.|.||.|||||..|.||.||..|.||||||||||||||||||||||||.
BPUM_2197___y 138 ACGTTATCCGCTAACGCAAGTCTTATTCAAACAAAAAGTATGGGACCGTC 187
BSNT_03674 239 A--AAGAAAAGATGAAGCAGTGAAGCAATACCATTTAACTCTGAGGGA-- 284
| ..||.||| |||.|.|||||.||.||.|||.|.||..|.|..||
BPUM_2197___y 188 ATCGTGAGAAG--GAATCTGTGAAACAGTATCATATTACGTTAAAAGACC 235
BSNT_03674 285 --AGGGTCAAAAGAATTCGGCGTTTTTGTGACGATTTCATTTGATCCTTA 332
| |.||||||||.||.||.|.|||.||.|||||.|.|.|.|||||
BPUM_2197___y 236 ACA----CCAAAGAATTTGGGGTATATGTCACTATTTCTTATAACCCTTA 281
BSNT_03674 333 TAGC-CAA--AAGGTCAATAAA---ATTGCCATATTAGAAGAATATCAAT 376
| ||| |||||||||||| |||| |..|||||||||||...|
BPUM_2197___y 282 ---CTCAAACAAGGTCAATAAAGTGATTG---TTGTAGAAGAATATAGCT 325
BSNT_03674 377 AA 378
||
BPUM_2197___y 326 AA 327
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