Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03665 and BPUM_2189
See
Amino acid alignment /
Visit
BSNT_03665 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:12
# Commandline: needle
# -asequence dna-align/BSNT_03665___gcvT.1.24716.seq
# -bsequence dna-align/BPUM_2189___gcvT.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03665___gcvT-BPUM_2189___gcvT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03665___gcvT-BPUM_2189___gcvT.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03665___gcvT
# 2: BPUM_2189___gcvT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1181
# Identity: 768/1181 (65.0%)
# Similarity: 768/1181 (65.0%)
# Gaps: 175/1181 (14.8%)
# Score: 2308.5
#
#
#=======================================
BSNT_03665___ 1 ATGCTGAAAAGAACGCCGTTATTTGACCTGTATAAGGAA---TATGGAGG 47
|||.|||||.||||.|||.|.|||.|...|||| ||| |.|||.|.
BPUM_2189___g 1 ATGTTGAAACGAACACCGCTTTTTCATGCGTAT---GAAACGTTTGGCGC 47
BSNT_03665___ 48 AAAAACGATTGATTTCGGAGGTTGGGAGCTTCCTGTTCAATTTTCTTCTA 97
||||||.|||||.|||||.||.|||||..|.|||||.|||||||||||.|
BPUM_2189___g 48 AAAAACCATTGACTTCGGGGGCTGGGAATTACCTGTCCAATTTTCTTCCA 97
BSNT_03665___ 98 TAAAAAAAGAACACGAGGCTGTCCGAAC---TGCAGCCGGTTTGTTTGAT 144
|.|||.||||.|||||.|||||.||||| .|||| ||.|| ||||||
BPUM_2189___g 98 TTAAAGAAGAGCACGAAGCTGTTCGAACAAAGGCAG--GGCTT-TTTGAT 144
BSNT_03665___ 145 GTATCTCATATGGGAGAAGTCGAAGT-----GTCAGGGAACGACAGTCTG 189
||.|||||.|||||.||.||.|||.| ||||.| |||.| ||.
BPUM_2189___g 145 GTGTCTCACATGGGTGAGGTGGAAATCAAAGGTCAAG--ACGCC---CTT 189
BSNT_03665___ 190 TCTTTTTTGCAAAGATTGATGACAAATGATGTTTCCGCGTTAACGC---C 236
.|||||||.|||||.||..|.||.||||||||.|| ||| || |
BPUM_2189___g 190 CCTTTTTTACAAAGGTTATTAACCAATGATGTGTC-----TAA-GCTGAC 233
BSNT_03665___ 237 AGGCCGT---GCTCAATATACAGCGATGTGTTACCCGGATGGCGGAACCG 283
||.|.|| ||.|.|||||||||.|||||.||....||||||||.||.|
BPUM_2189___g 234 AGACGGTAAGGCACTATATACAGCCATGTGCTATGAAGATGGCGGGACAG 283
BSNT_03665___ 284 TCGATGATTTGCTTATCTATCAAAAAGAAGAGAACCGCTATCTGCTTGTC 333
|.||||||.||||..||||.|||||||||.|||||...|||.|||||||.
BPUM_2189___g 284 TGGATGATCTGCTCGTCTACCAAAAAGAAAAGAACGATTATTTGCTTGTT 333
BSNT_03665___ 334 ATTAATGCTTCTAATATAGATAAAGACTTGGCTTGGATGAAAGAACATGC 383
||||||||.||||||||.||.|||||..|||..|||.|| .|.|
BPUM_2189___g 334 ATTAATGCATCTAATATCGAAAAAGATGTGGAATGGCTG-------CTTC 376
BSNT_03665___ 384 AGC----AGGTGATGTACAG----ATTGA--CAACCAG--TCAGATCAAA 421
||| |||||| |.|| | ||||| |||...| ||.|||.|||
BPUM_2189___g 377 AGCACCAAGGTGA-GAAC-GACGTATTGATCCAAAATGTCTCGGATGAAA 424
BSNT_03665___ 422 TCGCGCTCTTG---GCTGTACAGGGACC----------GAAAGCAGAAGC 458
|||| |||| ||..|.||.||||| ||.|
BPUM_2189___g 425 TCGC---CTTGCTTGCCCTTCAAGGACCTCTTGCCGCTGACA-------- 463
BSNT_03665___ 459 GGTCTTAAAAAATCTGACAGATGCAGATGTGTCTGCATTAAAGCCGTTTG 508
||.|.|||.||.|..|.||||.|||.|||.|..|..|.|||||.|||.
BPUM_2189___g 464 --TCATGAAAGATGTAGCGGATGAAGAAGTGACATCGCTCAAGCCATTTA 511
BSNT_03665___ 509 CGTTTATTGAT--GAAGCCGATATCAGCGGCCGCAAA-----GCACTTAT 551
|.|| ||.|| .||||.|| ||..| |.|||| |..|||.|
BPUM_2189___g 512 CATT--TTTATCAAAAGCTGA----AGTTG-CTCAAAAAGAGGTGCTTGT 554
BSNT_03665___ 552 TTCACGCACTGGCTATACGGGAGAAGACGGGTATGAAATTTACTGCCGCA 601
||||.|.||.|||||.||.|||||||||||.|.|||||||||||| .||
BPUM_2189___g 555 TTCAAGAACGGGCTACACTGGAGAAGACGGCTTTGAAATTTACTG--TCA 602
BSNT_03665___ 602 GT--GATGATGCTATGCATATTTGG--------AAAAAAATCATCGATGC 641
|| ||.|||||..|.||.|||||| |..|||| |.
BPUM_2189___g 603 GTCAGAAGATGCGGTCCACATTTGGTCGGCTTTATTAAAA--------GT 644
BSNT_03665___ 642 AGGGGATGCATACGGATTGATTCCATGCGGTCTCGGTGCACGTGATACAC 691
.||.|...||.|.||.||.||.||.||.||.||.||||||||.||.||..
BPUM_2189___g 645 TGGCGCACCAAAAGGGTTAATACCGTGTGGGCTTGGTGCACGAGACACCT 694
BSNT_03665___ 692 TCCGGTTTGAAGCGAAG-CTCCCGCTCTACGGTCAGGAGCTGACCCGGGA 740
|..|.|||||||| ||| ||.|||||.||.||.||||||||.||...|||
BPUM_2189___g 695 TGAGATTTGAAGC-AAGACTTCCGCTTTATGGCCAGGAGCTAACAAAGGA 743
BSNT_03665___ 741 TATTACACCGATT-GAAGCAGGTATAGGCTTTGCTGTAAAGCACAAA--- 786
|||..|.|| ||| ||||..||.||.||||||||.|| ||||
BPUM_2189___g 744 TATCTCTCC-ATTAGAAGGCGGGATTGGCTTTGCGGT------CAAAACG 786
BSNT_03665___ 787 ---AAAGAGTCTGACTTTTTCGGTAA-------GTCAGTATTGAGTGAA- 825
|||||..|..|.|||.|.||.|| .||| .|||
BPUM_2189___g 787 GATAAAGAAGCCAATTTTATTGGCAAAGAAGCGCTCA--------AGAAG 828
BSNT_03665___ 826 CAAAAAGAAAACGGAGCGAAGCGCAAACTTGTCGGTCTCGAAATGATTGA 875
|||||||||.|.||..|||||||.||.||||||||..|.||||||||.||
BPUM_2189___g 829 CAAAAAGAAGAAGGGCCGAAGCGAAAGCTTGTCGGCATTGAAATGATAGA 878
BSNT_03665___ 876 AAAAGGGATACCGCGGCACGGA-TATGAGG--TTTTC----CAAAATGGC 918
.||||||||.|||| ||||.|| |||..|| ||||| .|||| ||
BPUM_2189___g 879 TAAAGGGATTCCGC-GCACAGACTATCCGGTCTTTTCAGGAGAAAA--GC 925
BSNT_03665___ 919 AAGTCTGTCGGAAAGGTGACAACCGGCACGCAGTCACCGACTTTAGGGAA 968
||..||.||.| ||.|||||.|||||.||.||.||.||.|||..|||
BPUM_2189___g 926 -AGATTGGCGTA---GTCACAACGGGCACACAATCCCCAACATTAAAGAA 971
BSNT_03665___ 969 AAACGTCGGCCTTGCCTTAATTGA---TTCGGAAACAAGTG-AGATCGGG 1014
|||.|||||.|||||.|||||.|| ||| .||.|.| ||.|.||.
BPUM_2189___g 972 AAATGTCGGGCTTGCTTTAATCGAATCTTC----TCAGGCGCAGCTTGGA 1017
BSNT_03665___ 1015 ACTGTTGTAGATGTAGAGATTCGCAAAAAATTAGTGAAAGCAAAGGTTGT 1064
||.||.|||||.|||.|..||||.||||||....|.|||||.||..|.||
BPUM_2189___g 1018 ACAGTGGTAGAAGTACAAGTTCGTAAAAAACGTCTAAAAGCGAAAATCGT 1067
BSNT_03665___ 1065 CAAAACACCATTTTATAAA--CGCTAA---- 1089
|..|||||||||||||||| .||.||
BPUM_2189___g 1068 CGCAACACCATTTTATAAAAGAGCCAAATAA 1098
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.