Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03657 and BPUM_2184
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:11
# Commandline: needle
# -asequence dna-align/BSNT_03657___mntR.1.24716.seq
# -bsequence dna-align/BPUM_2184.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03657___mntR-BPUM_2184.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03657___mntR-BPUM_2184.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03657___mntR
# 2: BPUM_2184
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 444
# Identity: 355/444 (80.0%)
# Similarity: 355/444 (80.0%)
# Gaps: 24/444 ( 5.4%)
# Score: 1468.0
#
#
#=======================================
BSNT_03657___ 1 ATGACAACACCAAGTATGGAAGATTATATTGAACAGATTTATATGCTGAT 50
|||||.|||||.||||||||||||||.||||||||.||||||||||||||
BPUM_2184 1 ATGACTACACCTAGTATGGAAGATTACATTGAACAAATTTATATGCTGAT 50
BSNT_03657___ 51 TGAAGAAAAAGGATATGCACGAGTTTCCGATATCGCGGAAGCATTGGCAG 100
.|||||||||||||||||..||||.||.|||||.||.||||||.|.||.|
BPUM_2184 51 AGAAGAAAAAGGATATGCTAGAGTCTCTGATATTGCAGAAGCACTCGCTG 100
BSNT_03657___ 101 TCCATCCCTCCTCTGTAACAAAAATGGTTCAAAAACTAGATAAAGACGAA 150
|||||||||||||||||||||||||||||||.||.|||||||||||.|||
BPUM_2184 101 TCCATCCCTCCTCTGTAACAAAAATGGTTCAGAAGCTAGATAAAGATGAA 150
BSNT_03657___ 151 TATTTAATTTATGAAAAATATCGCGGTCTCGTGTTAACGTCTAAAGGGAA 200
||..|.||||||||.||.|||||.|||||..|.|||||..|.|||||.||
BPUM_2184 151 TACCTCATTTATGAGAAGTATCGTGGTCTAATTTTAACCCCGAAAGGCAA 200
BSNT_03657___ 201 AAAAATAGGCAAACGGCTGGTATACAGACATGAATTGCTTGAGCAGTTTT 250
||||||.||.|||||.||.|||||||||||||||.||||.|||||.||||
BPUM_2184 201 AAAAATTGGAAAACGTCTCGTATACAGACATGAACTGCTAGAGCAATTTT 250
BSNT_03657___ 251 TAAGAATCATTGGTGTTGATGAAGAGAAAATATATAACGATGTCGAAGGA 300
||||||||||||||||.||||||||||||||.|||.|.|||||.|||||.
BPUM_2184 251 TAAGAATCATTGGTGTAGATGAAGAGAAAATCTATGATGATGTAGAAGGC 300
BSNT_03657___ 301 ATCGAACATCATTTAAGCTGGAACAGTATTGATCGCATCGGGGATCTTGT 350
||.|||||||||.|.|||||||||||.|||||.||||||||.|||||.||
BPUM_2184 301 ATTGAACATCATCTCAGCTGGAACAGCATTGACCGCATCGGCGATCTCGT 350
BSNT_03657___ 351 TCAATATTTTGAAGAAGATGATGCCCGTAAAAAAGAT--------CTGAA 392
|||||..|||||||||..|||.| |..||| |||||
BPUM_2184 351 TCAATTCTTTGAAGAAAGTGACG--------AGCGATCTGTTCAGCTGAA 392
BSNT_03657___ 393 ATCAATCCAAAAGAAAACAGAAC-ATCATAATCAGTAA------ 429
|.|.||.||||||||||..|||| |.|| |||||..||
BPUM_2184 393 AGCGATTCAAAAGAAAAACGAACAAACA-AATCAAGAATCTTAA 435
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