Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03633 and BPUM_2167
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:10
# Commandline: needle
# -asequence dna-align/BSNT_03633___accB.1.24716.seq
# -bsequence dna-align/BPUM_2167___accB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03633___accB-BPUM_2167___accB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03633___accB-BPUM_2167___accB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03633___accB
# 2: BPUM_2167___accB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 518
# Identity: 370/518 (71.4%)
# Similarity: 370/518 (71.4%)
# Gaps: 73/518 (14.1%)
# Score: 1361.5
#
#
#=======================================
BSNT_03633___ 1 ATGTTAAATATCAAAGAAATCCACGAGCTGATTAAAGCAATTGACGAGTC 50
||||||||.|||.|||||||.||.||.|||||||||..||||||.||.||
BPUM_2167___a 1 ATGTTAAAAATCGAAGAAATTCATGAACTGATTAAATTAATTGATGAATC 50
BSNT_03633___ 51 TACAATTGACGAATTCGTA--TATGAAAATGAAGGTG----TATCCTTAA 94
.||||||||.||||| || ||.|||||.||||||| .||| |
BPUM_2167___a 51 AACAATTGATGAATT--TACGTACGAAAACGAAGGTGCAAAAATC----A 94
BSNT_03633___ 95 AACTGAAAAAACACGAAGCAGGCACGGTTCAAGTCATGCAGCA------G 138
|||||||.|||.|..||| |||||.|.||||| |
BPUM_2167___a 95 AACTGAAGAAAAATAAAG------------AAGTCGTTCAGCAAGTTGCG 132
BSNT_03633___ 139 GCACCGGCA------GCACCTGTACAAGCACAGGCTCCGCAGGCAGTTCA 182
||||..||| ||.|||||.|||||| |||| |||.|||
BPUM_2167___a 133 GCACAAGCATCTGTGGCTCCTGTCCAAGCA---GCTC------CAGCTCA 173
BSNT_03633___ 183 GCCGCAAGC-------GCAGCAAG---CAGC---------GGCACCTGCC 213
.||||| ||| |||| |||| .||.|||||.
BPUM_2167___a 174 ---ACAAGCTCCTAAAGCA-CAAGCTCCAGCTCAGACCGAAGCCCCTGCA 219
BSNT_03633___ 214 CAAGAAGCACCAAAG-CAAGATGAGAATCTGCATAAAATCACTTCACCAA 262
|||||.|||.|...| | |||.||||||||||||||.||.||.||||
BPUM_2167___a 220 CAAGAGGCAGCTGCGTC----TGACAATCTGCATAAAATTACATCCCCAA 265
BSNT_03633___ 263 TGGTAGGAACATTTTATGCTTCTTCATCACCGGAAGCTGGCCCGTATGTA 312
||||.||.||||||||||||||.||.|||||.|||||.||.||.||.||.
BPUM_2167___a 266 TGGTTGGCACATTTTATGCTTCATCTTCACCAGAAGCAGGTCCTTACGTG 315
BSNT_03633___ 313 ACAGCCGGTTCAAAAGTAAATGAAAACACAGTTGTCTGCATTGTAGAAGC 362
|||.|.|||||.||.||.||.||||||||||||||.|||||.||||||||
BPUM_2167___a 316 ACAACAGGTTCTAAGGTGAACGAAAACACAGTTGTGTGCATCGTAGAAGC 365
BSNT_03633___ 363 GATGAAGCTTTTCAACGAAATCGAAGCAGAAGTGAAAGGCGAAATCGTTG 412
||||||.||.||.||.|||||||||||||||||.|||||.||||||||.|
BPUM_2167___a 366 GATGAAACTGTTTAATGAAATCGAAGCAGAAGTAAAAGGTGAAATCGTCG 415
BSNT_03633___ 413 AAGTATTAGTAGAAAACGGCCAGCTGGTCGAATACGGACAACCTCTATTT 462
|||||||||..||.|||||.|||||.||.||||.|||||||||.||.|||
BPUM_2167___a 416 AAGTATTAGCTGAGAACGGTCAGCTTGTAGAATTCGGACAACCCCTCTTT 465
BSNT_03633___ 463 CTTGTAAAAGCGGAGTAA 480
||.||.|||||.||||||
BPUM_2167___a 466 CTAGTGAAAGCAGAGTAA 483
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