Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03630 and BPUM_2165
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:10
# Commandline: needle
# -asequence dna-align/BSNT_03630___yqhY.1.24716.seq
# -bsequence dna-align/BPUM_2165___yqhY.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03630___yqhY-BPUM_2165___yqhY.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03630___yqhY-BPUM_2165___yqhY.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03630___yqhY
# 2: BPUM_2165___yqhY
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 425
# Identity: 300/425 (70.6%)
# Similarity: 300/425 (70.6%)
# Gaps: 34/425 ( 8.0%)
# Score: 1005.0
#
#
#=======================================
BSNT_03630___ 1 ATGAAAGACAACAGCTTGCTTAAAATGGA---TCACGAAGATACGCATTT 47
.||..|||.||||..||||||.|||||.| |.|.|||||| ||.||
BPUM_2165___y 1 GTGTCAGAAAACAATTTGCTTGAAATGAACCTTGATGAAGAT---CAATT 47
BSNT_03630___ 48 GGGTAAGGTTGAGATTGCACCGGAGGTCATTGAGGTCATTGCCGGCATTG 97
.||.||.||..|.||||||||.||.||.|||||.||||||||.||.||.|
BPUM_2165___y 48 AGGAAAAGTGCAAATTGCACCAGAAGTGATTGAAGTCATTGCTGGGATCG 97
BSNT_03630___ 98 CAGCATCAGAAGTTGATGGGGTTGCCGAAATGCGCGGAAACTTTGCGACA 147
|.||.||||||||.||.||..||||||||||||||||.||.||.||..|.
BPUM_2165___y 98 CCGCTTCAGAAGTCGAAGGCATTGCCGAAATGCGCGGCAATTTCGCTGCT 147
BSNT_03630___ 148 GGCGTCGTTGAGCGCTTTGGCAAAGTGAATCATGGCAAAGGTGTCAAAGT 197
|..||.|..||.||.|||||.|||...|||||..|.||||||||.|||||
BPUM_2165___y 148 GATGTAGCAGAACGTTTTGGTAAAAAAAATCACCGTAAAGGTGTGAAAGT 197
BSNT_03630___ 198 CGACCTGGCGGAAGACGGAATTACGATCGATGTATACTGTGTCGTTACAT 247
.||..|..|.||.||.||.||.||.|||||||||||.|||||..||..||
BPUM_2165___y 198 AGATGTCTCTGATGAAGGCATCACAATCGATGTATATTGTGTGATTGAAT 247
BSNT_03630___ 248 TTGGCGTTTCGATTCCGAAAGTTGCAGCATCC------GTTCAGGAAAAC 291
|||||.|.||.|||||.||.|| |||| ||.||.|||||.
BPUM_2165___y 248 TTGGCCTATCCATTCCAAAGGT------ATCCACTGCTGTACAAGAAAAT 291
BSNT_03630___ 292 ATTCGTCAAAC-CTTATTAAATATGAC-GTCTCTTTCGATTAACGAGATC 339
||||||||||| ||| ||.||.||||| |.|| |..|||||||.||.|||
BPUM_2165___y 292 ATTCGTCAAACTCTT-TTGAACATGACTGCCT-TAACGATTAATGAAATC 339
BSNT_03630___ 340 AATATTCACATCGTCGGCATTCAATTTGACACAAA---AGCCCA---AGA 383
||||||||..||||.||.|||||||||||.||||| |||..| .||
BPUM_2165___y 340 AATATTCATGTCGTTGGTATTCAATTTGATACAAAGTCAGCTGAGGCTGA 389
BSNT_03630___ 384 AGTCCAAATCGACGAAGAAATGTAA 408
||| |.||| |||||||||||
BPUM_2165___y 390 AGT--AGATC----AAGAAATGTAA 408
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