Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03622 and BPUM_2161

See Amino acid alignment / Visit BSNT_03622 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:09
# Commandline: needle
#    -asequence dna-align/BSNT_03622.1.24716.seq
#    -bsequence dna-align/BPUM_2161___xseB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03622-BPUM_2161___xseB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03622-BPUM_2161___xseB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03622
# 2: BPUM_2161___xseB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 262
# Identity:     203/262 (77.5%)
# Similarity:   203/262 (77.5%)
# Gaps:           8/262 ( 3.1%)
# Score: 759.5
# 
#
#=======================================

BSNT_03622         1 ATGACAGA---CGTGAAAAAAAATGAA-AAC--ATGACATTTGAAGAAGC     44
                     ||||||||   |...|||.||||.||| |||  ||||||||||||||.||
BPUM_2161___x      1 ATGACAGAATCCAATAAACAAAAAGAAGAACAAATGACATTTGAAGAGGC     50

BSNT_03622        45 GATGAAAGGGCTTGA-GAGCATTGTATCAAAGCTTGAAGAGGGAGATGTG     93
                     |||||||||.||||| ||| |||||...||||||.|||||.||||||||.
BPUM_2161___x     51 GATGAAAGGTCTTGAGGAG-ATTGTGGGAAAGCTCGAAGAAGGAGATGTA     99

BSNT_03622        94 CCTCTAGAGCAAGCCATTAACTATTTCCAAGAAGGCATGGCTCTGTCAAA    143
                     ||.||.|||||.||||||.|.|||||.||||||||||||.|.||.||.||
BPUM_2161___x    100 CCACTTGAGCAGGCCATTCATTATTTTCAAGAAGGCATGACCCTTTCGAA    149

BSNT_03622       144 AATGTGCCATGAAAAGCTGCAAAAAGTCGAAAAGCAAATGGACTTCATTT    193
                     ..|.||.||||||||..|.|||.|.||.|||||.||||||||.|||||||
BPUM_2161___x    150 GCTTTGTCATGAAAAATTACAACATGTTGAAAAACAAATGGATTTCATTT    199

BSNT_03622       194 TAAAAGAAGACGGCGAACTGGCACCTTTCAGTGTTCAGGAGGAAGACGAA    243
                     |||||||.|||||.||.|||||.||.|||...||..||||||.|||....
BPUM_2161___x    200 TAAAAGAGGACGGTGAGCTGGCTCCATTCTCGGTGAAGGAGGCAGATTCT    249

BSNT_03622       244 GGTGACAAATAA    255
                     ||||||||.|||
BPUM_2161___x    250 GGTGACAAGTAA    261


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