Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03616 and BPUM_2157
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:09
# Commandline: needle
# -asequence dna-align/BSNT_03616___ahrC.1.24716.seq
# -bsequence dna-align/BPUM_2157___ahrC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03616___ahrC-BPUM_2157___ahrC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03616___ahrC-BPUM_2157___ahrC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03616___ahrC
# 2: BPUM_2157___ahrC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 457
# Identity: 341/457 (74.6%)
# Similarity: 341/457 (74.6%)
# Gaps: 14/457 ( 3.1%)
# Score: 1242.5
#
#
#=======================================
BSNT_03616___ 1 ATGAACAAAGGCCAGAGGCATATTAAAATCAGAGAGATCATTACAAGCAA 50
||||..|||||.||.|||||||||||.||.|||||.|||||..|.|||.|
BPUM_2157___a 1 ATGACTAAAGGTCAAAGGCATATTAAGATTAGAGAAATCATCGCGAGCCA 50
BSNT_03616___ 51 TGAAATCGAAACGCAGGATGAATTGGTCGACATGCTGAAGCAG--GATGG 98
.|||||.|||||.||.||||||.|.||.||.||..|.|| || |||||
BPUM_2157___a 51 AGAAATTGAAACACAAGATGAACTAGTTGATATTTTAAA--AGCCGATGG 98
BSNT_03616___ 99 ATACAAAGTAACGCAGGCCACGGTATCACGGGATATTAAAGAACTTCACC 148
|||.||..|.||.||.||.||.||||||.|.||||||||||||.|.||..
BPUM_2157___a 99 ATATAACATTACACAAGCGACCGTATCAAGAGATATTAAAGAATTGCATT 148
BSNT_03616___ 149 TTGTAAAAGTGCCTACAAATAATGGTTCTTACAAATACAGTCTTCCGGCG 198
|.||.||||||||.||.||.|||||..|.||.||||||||.|||||.|||
BPUM_2157___a 149 TAGTGAAAGTGCCAACGAACAATGGAACGTATAAATACAGCCTTCCTGCG 198
BSNT_03616___ 199 GACCAGCGTTTCAATCCGCTGTCAAAGCTAAAGCGGGCATTGATGGACGC 248
||.|||||.||.|||||||||||.||.||.|||||..|.||.||||||||
BPUM_2157___a 199 GATCAGCGGTTTAATCCGCTGTCTAAACTGAAGCGATCCTTAATGGACGC 248
BSNT_03616___ 249 ATTTGTGAAAATAGACTCAGCAAGCCATATGATTGTGCTGAAAACGATGC 298
||||.|.|||||.||..|.||.||.|||.|.||.||.||.|||||.||||
BPUM_2157___a 249 ATTTATTAAAATGGATGCTGCCAGTCATTTAATCGTCCTCAAAACCATGC 298
BSNT_03616___ 299 CGGGCAATGCCCAGGCAATCGGGGCGCTGATGGACAATTTGGACTGGGAT 348
||||.|||||.||.||.||.|||||..|.|||||.|||||.||.|||||.
BPUM_2157___a 299 CGGGTAATGCTCAAGCGATTGGGGCTTTAATGGATAATTTAGATTGGGAA 348
BSNT_03616___ 349 GAAATGATGGGGACCATTTGCGGAGATGATACGATTTTAATTATTTGCCG 398
|||||.|||||.||||||||||||||||||||.|||||.||.||||||||
BPUM_2157___a 349 GAAATCATGGGAACCATTTGCGGAGATGATACCATTTTGATCATTTGCCG 398
BSNT_03616___ 399 GACTCCTGAAGATACAGAAGGCGT---AA--AAAACAGGCTCCTTGAACT 443
.||.||.||.|||||.|||...|| || |||| |..|.||.||
BPUM_2157___a 399 CACACCAGATGATACGGAAACAGTTTCAAGCAAAA-----TTTTAGAGCT 443
BSNT_03616___ 444 GCTGTAA 450
.||.|||
BPUM_2157___a 444 ACTATAA 450
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