Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03614 and BPUM_2156
See
Amino acid alignment /
Visit
BSNT_03614 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:08
# Commandline: needle
# -asequence dna-align/BSNT_03614___recN.1.24716.seq
# -bsequence dna-align/BPUM_2156___recN.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03614___recN-BPUM_2156___recN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03614___recN-BPUM_2156___recN.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03614___recN
# 2: BPUM_2156___recN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1812
# Identity: 1248/1812 (68.9%)
# Similarity: 1248/1812 (68.9%)
# Gaps: 156/1812 ( 8.6%)
# Score: 4026.5
#
#
#=======================================
BSNT_03614___ 1 TTGTTAGCTGAACTATCGATTAAAAACTTTGCCATTATTGAGGAACTGAC 50
.|||||||.||||||.|.||||||||||||||.||.|||||.||..|.||
BPUM_2156___r 1 GTGTTAGCAGAACTAACCATTAAAAACTTTGCAATCATTGAAGAGTTAAC 50
BSNT_03614___ 51 GGTTTCTTTTGAACGCGGGCTTACGGTTTTAACAGGAGAAACCGGAGCCG 100
||||||.||||||...||.||.|||||..||||.||.|||||.||.||.|
BPUM_2156___r 51 GGTTTCATTTGAAAAAGGACTCACGGTCCTAACGGGGGAAACAGGTGCAG 100
BSNT_03614___ 101 GCAAATCCATCATCATAGATGCCATTTCTCTTTTAGTCGGAGGCCGCGGA 150
|.|||||||||||.||.|||||..|.||.|||.|.||.|||||..|.||.
BPUM_2156___r 101 GGAAATCCATCATGATCGATGCTGTCTCACTTCTTGTGGGAGGTAGAGGG 150
BSNT_03614___ 151 TCATCTGAATTTGTTAGATATGGGGAAGCAAAAGCCGAACTTGAAGGGCT 200
||.||||||||||||.|.|||||.||...||||||.||.||.||.|||||
BPUM_2156___r 151 TCGTCTGAATTTGTTCGTTATGGTGAGAAAAAAGCTGAGCTGGAGGGGCT 200
BSNT_03614___ 201 GTTTCTGTTGGA-GAGCGGC----CATCCTGTTTTAGGCGTATGCGCTGA 245
.|||| |||.| .|||.|| ||.|||||.||.|...||||||..||
BPUM_2156___r 201 TTTTC--TTGTACCAGCAGCCGATCACCCTGTATTTGCTTTATGCGAGGA 248
BSNT_03614___ 246 GCAGGGAATCGACGTTTCAGACGAAATGA----TCGTCATGAGAAGGGAT 291
|||.|||||.||||..||.||.||||||| ||.|| |..|.|||
BPUM_2156___r 249 GCAAGGAATTGACGCATCGGATGAAATGATGATTCTTC----GCCGTGAT 294
BSNT_03614___ 292 ATCAGCACGAGCGGGAAAAGCGTTTGCCGTGTCAATGGCAAGCTTGTCAC 341
||.|.||..|.||||||||||.|.|||||..|||||||||||||.|||||
BPUM_2156___r 295 ATGAACAATAACGGGAAAAGCATCTGCCGCATCAATGGCAAGCTCGTCAC 344
BSNT_03614___ 342 GAT-----TGCTTCGCTAAGAGAGATCGGCAGGCTTTTATTAGATATTCA 386
.|| |..|.|||.||| |.||..|.|||||..|.|||||.||
BPUM_2156___r 345 AATCTCACTTTTACGCGAAG-----TAGGACGCCTTTTGCTCGATATACA 389
BSNT_03614___ 387 CGGACAGCACGATAACCAGCTGTTAATGGAAGACGAAAATCATCTCGAGC 436
.|||||.||.|||||||||.|.||.|||||.||.||||||||||| ||
BPUM_2156___r 390 TGGACAACATGATAACCAGTTATTGATGGAGGATGAAAATCATCT---GC 436
BSNT_03614___ 437 TTTTG---GA-CAAGTTTGCCGGGGCCGAAGTGGAAAGCGC----GCT-- 476
.|||| || |||.|| ||.||.||| ||||..|| |||
BPUM_2156___r 437 ATTTGCTCGATCAATTT----GGTGCAGAA---GAAATTGCACCTGCTTT 479
BSNT_03614___ 477 ----CAAAACGTATCAGGAAGGATACCAGCGGTATATGAAG-CTGCTCAA 521
|| ||||||.||||.|||..|||..||||..||| |.|| |.|
BPUM_2156___r 480 GTCGCA----GTATCAAGAAGCATATGAGCAATATACAAAGACAGC-CCA 524
BSNT_03614___ 522 AAAGCTTAAGCAGCTTTCTGAAAGCGAACAGGAAATGGCCCATCGTCTTG 571
||||||.||.|||||.|||||||..||.||.|||||||..||.||..|.|
BPUM_2156___r 525 AAAGCTAAAACAGCTCTCTGAAAATGAGCAAGAAATGGTGCACCGGTTAG 574
BSNT_03614___ 572 ATCTTA-TTCAATTTCAGCTCGAAGAAATCGAATCGGCAAAGCTTGAGCT 620
|| ||| |.|||||||||||.|||||.||.|||.|||||.|..|.||||
BPUM_2156___r 575 AT-TTACTGCAATTTCAGCTAGAAGAGATTGAAGCGGCACAATTAGAGC- 622
BSNT_03614___ 621 TAAC----GAAGATGAACAGCTCCAAGAAGAGCGCCAGCAAATTTCA--A 664
| |||||.||..||||.|||||||||||.||.||.| ||| |
BPUM_2156___r 623 ---CGGGAGAAGACGAGAAGCTTCAAGAAGAGCGTCATCAGA--TCAGCA 667
BSNT_03614___ 665 ACTTTGAGAAGATATATGAGTCGCTGCAAAATGCATATAACGCGCTT-CG 713
|||..||.|||||.|.|...||.||.|||||.||.|||||.|| ||| ||
BPUM_2156___r 668 ACTACGAAAAGATCTTTTCCTCACTCCAAAACGCCTATAATGC-CTTGCG 716
BSNT_03614___ 714 CAGTGAGCAGGGCGGATTGGACTGGGTTGGAATGGCATC-AGCGCAGCTT 762
||.|||.|||||.|||.|.||.||||||||.|||.|||| |||| ||||.
BPUM_2156___r 717 CAATGAACAGGGGGGACTTGATTGGGTTGGCATGTCATCAAGCG-AGCTC 765
BSNT_03614___ 763 GAAGATATATCTGATATAAACGAACCGCTGAAAAAAATGTCTGA--AAGT 810
||..|..|.|||||.||.|||||....|||||||||.|.||.|| ||||
BPUM_2156___r 766 GATCAGGTTTCTGAAATCAACGATGATCTGAAAAAACTATCCGAACAAGT 815
BSNT_03614___ 811 GTTTCGAACTCCTACTATTTGCTTGAGGATGCCACATTTCAGATGAGAAA 860
| ||||||||.||||||||..|.||.|||.|.||.||.||.|||||||.
BPUM_2156___r 816 G--TCGAACTCTTACTATTTATTAGAAGATTCGACGTTCCAAATGAGAAG 863
BSNT_03614___ 861 TATGCTGGATGAGCTTGAATTTGATCCGGAACGCCTGAACTATATTGAGA 910
.|||||||||.|..|.||||||||.||.|.|||.||..|.|.|||||||.
BPUM_2156___r 864 CATGCTGGATCAATTAGAATTTGACCCTGCACGTCTTGATTTTATTGAGT 913
BSNT_03614___ 911 CGCGACTTAATGAAATCAAACAGCTGAAACGAAAATACGGTGCCACTGTT 960
|..|.||.||||||||.||.|||.|.||||||||.|||||..|.||.|||
BPUM_2156___r 914 CTAGGCTGAATGAAATGAAGCAGTTAAAACGAAAGTACGGGACGACGGTT 963
BSNT_03614___ 961 GAAGACATTTTGGAATATGCTTCTAAAATTGAAGAAGAGATTGACCAAAT 1010
||.||.||||||||.|||||..|.||.|||||||||||.||.||.|||||
BPUM_2156___r 964 GAGGAAATTTTGGAGTATGCGGCGAAGATTGAAGAAGAAATCGATCAAAT 1013
BSNT_03614___ 1011 TGAAAACAGGGACAGCCACCTTCA-AAGCTTGAAAAAGGAGCTTGACTCC 1059
|.||||..|.||||..||.||.|| |.|||| |||||..|.||.||
BPUM_2156___r 1014 TCAAAATCGAGACACTCATCTGCAGACGCTT-AAAAACAAACTGGA---- 1058
BSNT_03614___ 1060 GTCGGCAAAGA----TGTCGCAGTG---GAAGCGGCAAATGTGTCACAAA 1102
.||||.|| ||.||||.|| |||||....||.||.||..|..
BPUM_2156___r 1059 ---TGCAATGAGCCGTGACGCACTGCTTGAAGCACTTAACGTTTCGGAGC 1105
BSNT_03614___ 1103 TCCGAAAAACATGGGCGAAAAAGCTGGCTGATG-AGATTCATCGGGAATT 1151
|.||.||||.||||||.||||||||.|| ||.| |.|||||....|||.|
BPUM_2156___r 1106 TTCGTAAAAAATGGGCCAAAAAGCTAGC-GAAGCAAATTCAAACAGAACT 1154
BSNT_03614___ 1152 AAAAAGCCTGTACATGGAAAAATCAACTTTTGATA--------------C 1187
|||.....||||.|||||.||.|||||.||||||| |
BPUM_2156___r 1155 AAAGGATTTGTATATGGAGAAGTCAACGTTTGATACATCCTTTTCTATTC 1204
BSNT_03614___ 1188 GGAA------TTTAAGGTCAGAACAGCGTCACGCAATGAAGAGGCTCCGC 1231
||.| |||.|| |||.|||| ||.| |||||
BPUM_2156___r 1205 GGTATGCGCCTTTTAG--CAGCACAG---------ATAA------TCCGC 1237
BSNT_03614___ 1232 TTGTAAACGGCCAGCCCGTTCAGCTGACTGAACAA--GGGATTGACCTGG 1279
|..||.|.||..|||||||.||||| |.|||.|| ||.|||||
BPUM_2156___r 1238 TCCTAGATGGAAAGCCCGTCCAGCT--CGGAAAAAACGGAATTGA----- 1280
BSNT_03614___ 1280 TGAAG-----TTTTTAATTTCGACCAATACAGGCGAGCCGCTGAAATCCC 1324
|.||| |||.|.|||||.||.|||.|.|||||.|||.|||||||..
BPUM_2156___r 1281 TCAAGCTCAATTTGTGATTTCTACTAATCCTGGCGAACCGATGAAATCTT 1330
BSNT_03614___ 1325 TTTCGAAAGTCGCTTCAGGTGGAGAGCTGTCACGGGTGATGCTTGCCATA 1374
|.||.|||||.||.||.||||||||..|.|||||.||||||||.||..|.
BPUM_2156___r 1331 TATCAAAAGTTGCGTCCGGTGGAGAAATTTCACGTGTGATGCTCGCTGTG 1380
BSNT_03614___ 1375 AAAAGCATTTTTTCTTCACAACAGGATGTGACATCGATCATTTTTGATGA 1424
|||||.||.||.||..|..||||.||.||.||.||.||.|||||.|||||
BPUM_2156___r 1381 AAAAGTATCTTCTCAGCCAAACAAGAAGTCACTTCCATTATTTTCGATGA 1430
BSNT_03614___ 1425 GGTTGATACCGGTGTAAGCGGCAGGGTCGCACAGGCAATCGCAGAGAAGA 1474
|||.|||||.||||||||.|||||.||.||||||||.||.||.|||||.|
BPUM_2156___r 1431 GGTCGATACGGGTGTAAGTGGCAGAGTTGCACAGGCGATTGCTGAGAAAA 1480
BSNT_03614___ 1475 TCCATAAGGTGTCAATAGGATCACAAGTGCTGTGCATTACACACCTGCCT 1524
|..|.||.|||.|....||.|||||||||||.||||||||.|||||.||.
BPUM_2156___r 1481 TTTACAAAGTGGCGGCTGGCTCACAAGTGCTCTGCATTACGCACCTCCCG 1530
BSNT_03614___ 1525 CAGGTGGCTGCCATGGCCGATACGCATCTTTATATTGCGAAGGA-GCT-A 1572
||.||.||.||.|||||.||.|||||.||.|..|||.|.|| | ||| .
BPUM_2156___r 1531 CAAGTAGCAGCAATGGCTGACACGCACCTCTTCATTTCAAA--ACGCTCT 1578
BSNT_03614___ 1573 AAAGACGGCAGAACGAC-GACACGTGTCAAGCCGCT--CTCTAAGCAGGA 1619
||||..||.||||| || ||||.|||||||.||..| .|| |.|.||.|
BPUM_2156___r 1579 AAAGCTGGTAGAAC-ACTGACAAGTGTCAAACCATTAAGTC-ATGAAGAA 1626
BSNT_03614___ 1620 AAAGGTAGCGGAAATCGGGCGCATGATTGCAGGTGTCGAAGTAACCGACT 1669
||||..|| .|||||.||..|.||||||||.|||||.|||||.||.||..
BPUM_2156___r 1627 AAAGTGAG-TGAAATTGGCAGGATGATTGCGGGTGTGGAAGTCACTGAGC 1675
BSNT_03614___ 1670 TAACGAAACGCCATGCGAAAGAACTTTTAAAACAAGCGGATCAAGTCAAA 1719
|.||.||||..||.||.||||||.|..|..|.|||||..||.|.||||||
BPUM_2156___r 1676 TGACAAAACAGCACGCAAAAGAATTGCTCCACCAAGCAAATGATGTCAAA 1725
BSNT_03614___ 1720 ACAACTGGGTAA 1731
|||||.|||||.
BPUM_2156___r 1726 ACAACAGGGTAG 1737
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.