Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03584 and BPUM_2147
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:07
# Commandline: needle
# -asequence dna-align/BSNT_03584___bcd.1.24716.seq
# -bsequence dna-align/BPUM_2147___bcd.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03584___bcd-BPUM_2147___bcd.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03584___bcd-BPUM_2147___bcd.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03584___bcd
# 2: BPUM_2147___bcd
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1098
# Identity: 853/1098 (77.7%)
# Similarity: 853/1098 (77.7%)
# Gaps: 6/1098 ( 0.5%)
# Score: 3268.0
#
#
#=======================================
BSNT_03584___ 1 ATGGAACTTTTTAAATATATGGAGAAATACGATTACGAACAATTGGTATT 50
|||||||||||||||||||||||...|||||||||.||.||..|.|||||
BPUM_2147___b 1 ATGGAACTTTTTAAATATATGGAACGATACGATTATGAGCAGCTTGTATT 50
BSNT_03584___ 51 CTGCCAGGATGAACAATCTGGCTTAAAAGCGATTATCGCGATTCATGATA 100
.||.||||||||||||||||||||||||||||||||.||.||||||||||
BPUM_2147___b 51 TTGTCAGGATGAACAATCTGGCTTAAAAGCGATTATTGCCATTCATGATA 100
BSNT_03584___ 101 CAACGCTTGGTCCGGCGCTTGGCGGAACGAGAATGTGGACATATGAAAAT 150
||||.|||||.||.||.||.|||||.||.|||||||||||.||||||||.
BPUM_2147___b 101 CAACACTTGGGCCAGCACTAGGCGGGACAAGAATGTGGACGTATGAAAAC 150
BSNT_03584___ 151 GAAGAAGCGGCTATTGAAGATGCGCTCAGATTGGCTAGAGGCATGACCTA 200
||||||||.||.||.|||||||||||..|..|.||.|||||.|||||.||
BPUM_2147___b 151 GAAGAAGCAGCGATCGAAGATGCGCTTCGTCTAGCAAGAGGGATGACTTA 200
BSNT_03584___ 201 TAAGAACGCGGCGGCAGGCTTAAACCTTGGCGGCGGAAAAACAGTCATTA 250
|||.|||||.||.||||||.|.||.|||||||||||.||||||||.||.|
BPUM_2147___b 201 TAAAAACGCAGCAGCAGGCCTGAATCTTGGCGGCGGGAAAACAGTTATCA 250
BSNT_03584___ 251 TCGGCGATCCGCGCAAAGACAAAAATGAGGAAATGTTCCGCGCGTTTGGC 300
||||.||.||..|.|||||.||||||||.|||||||||||.||||||||.
BPUM_2147___b 251 TCGGTGACCCAAGAAAAGATAAAAATGAAGAAATGTTCCGTGCGTTTGGA 300
BSNT_03584___ 301 CGCTATATTCAAGGGCTGAACGGCAGATACATCACGGCTGAAGATGTGGG 350
|||||.||.|||||..|.||.|||.|.||.|||||.||.||.|||||.||
BPUM_2147___b 301 CGCTACATACAAGGATTAAATGGCCGCTATATCACAGCAGAGGATGTCGG 350
BSNT_03584___ 351 CACAACGGTCGAGGACATGGATATCATTCATGATGAAACAGACTACGTTA 400
.||||||||.||.|||||||||.|.||||||||.||||||.|||..||.|
BPUM_2147___b 351 TACAACGGTTGAAGACATGGATCTGATTCATGAAGAAACAAACTTTGTGA 400
BSNT_03584___ 401 CAGGGATTTCTCCTGCTTTCGGCTCTTCTGGAAATCCTTCTCCAGTCACG 450
||||.||.||||||||.||.||.||.|||||||||||.|||||.||.|||
BPUM_2147___b 401 CAGGTATATCTCCTGCATTTGGTTCATCTGGAAATCCGTCTCCTGTTACG 450
BSNT_03584___ 451 GCGTACGGGGTGTATAGAGGAATGAAGGCAGCAGCTAAAGCTGCTTTCGG 500
||.|||||.||.||||.|||.|||||.||.||.||.||||||||.|||||
BPUM_2147___b 451 GCTTACGGTGTATATAAAGGGATGAAAGCTGCTGCCAAAGCTGCATTCGG 500
BSNT_03584___ 501 AACCGACTCTCTTGAAGGAAAAAACATTGCTGTACAGGGTGTTGGGAACG 550
.|||||.||..|.||||||||||..|||||.||.||.|||||||||||.|
BPUM_2147___b 501 TACCGATTCATTAGAAGGAAAAACGATTGCAGTCCAAGGTGTTGGGAATG 550
BSNT_03584___ 551 TAGCCTATAACCTTTGCCGCCACTTGCATGAAGAAGGAGCAAACTTAATC 600
|.||.||.||..|.||....||..||||.||||||||.||..|..||||.
BPUM_2147___b 551 TCGCGTACAATTTGTGTAAACATCTGCACGAAGAAGGTGCGCAGCTAATT 600
BSNT_03584___ 601 GTTACAGATATCAACAAACAATCTGTACAGCGTGCAGTTGAAGATTTTGG 650
||.|||||||||||||||.|.||||||.|.||.||.||.|||||.|||||
BPUM_2147___b 601 GTCACAGATATCAACAAAGACTCTGTAAAACGAGCTGTAGAAGACTTTGG 650
BSNT_03584___ 651 CGCCCGTGCGGTAGATCCTGATGATATTTATTCACAAGACTGCGATATTT 700
|||....||.|||||.|||||.|||||||||...||||..||.|||||.|
BPUM_2147___b 651 CGCAAAAGCAGTAGACCCTGACGATATTTATGATCAAGCATGTGATATCT 700
BSNT_03584___ 701 ATGCGCCGTGTGCCCTTGGTGCGACTATTAACGACGACACCATTAAACAG 750
||||.||.|||||.||||||||.||.|||||.||.|..||.|||....||
BPUM_2147___b 701 ATGCACCTTGTGCACTTGGTGCAACGATTAATGATGTAACGATTCCTAAG 750
BSNT_03584___ 751 CTGAAGGCGAAAGTGATCGCAGGTGCGGCTAACAACCAATTAAAAGAGAC 800
|||||.||.||.||.|||||||||||.||.||.|||||..| .|||||.
BPUM_2147___b 751 CTGAAAGCAAAGGTTATCGCAGGTGCAGCGAATAACCAGCT--GAGAGAA 798
BSNT_03584___ 801 ACGC--CATGGTGATCAAATTCACGAAATGGGCATCGTTTATGCACCGGA 848
|||| ||.||.||||..|||||.|||||||||||.||.||||||||.||
BPUM_2147___b 799 ACGCATCACGGCGATCTGATTCATGAAATGGGCATTGTGTATGCACCTGA 848
BSNT_03584___ 849 TTACGTGATTAACGCGGGCGGTGTCATCAACGTGGCAGATGAGCTTTACG 898
|||.||.||.||.||.|||||.|||||.|||||.||.|||||.||.||.|
BPUM_2147___b 849 TTATGTAATCAATGCAGGCGGCGTCATTAACGTTGCTGATGAACTGTATG 898
BSNT_03584___ 899 GCTATAATGCAGAACGTGCATTGAAAAAAGTTGAAGGCATTTACGGCAAT 948
|||||||||||||.|||||..|||||||.||.|||||.|||||....||.
BPUM_2147___b 899 GCTATAATGCAGATCGTGCGATGAAAAAGGTAGAAGGTATTTATCAAAAC 948
BSNT_03584___ 949 ATCGAGCGTGTACTTGAGATTTCTCAGCGTGACGGCATTCCTGCATATTT 998
||.||.||.||..||||.|||||..|.|||||.|.||||||..|.|||..
BPUM_2147___b 949 ATTGAACGCGTCATTGAAATTTCAAACCGTGATGCCATTCCAACTTATAA 998
BSNT_03584___ 999 AGCGGCTGACCGCTTAGCAGAGGAACGGATTGAACGCATGCGCCGCTCAA 1048
||||||.|||||.||.||.|||||.||.||||||.|.||||||...||||
BPUM_2147___b 999 AGCGGCAGACCGATTGGCGGAGGAGCGAATTGAAAGAATGCGCAAATCAA 1048
BSNT_03584___ 1049 GAAGCCAGTTTTTGCAAAACGGCC-ACAGTGTATTAAGCAGACGTTAA 1095
||||.||.||..|||||||.|||| ||| |.|.|||||..|.||.|||
BPUM_2147___b 1049 GAAGTCAATTCCTGCAAAATGGCCAACA-TATTTTAAGTCGTCGCTAA 1095
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