Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03501 and BPUM_2084

See Amino acid alignment / Visit BSNT_03501 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:01
# Commandline: needle
#    -asequence dna-align/BSNT_03501___fur.1.24716.seq
#    -bsequence dna-align/BPUM_2084___fur.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03501___fur-BPUM_2084___fur.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03501___fur-BPUM_2084___fur.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03501___fur
# 2: BPUM_2084___fur
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 463
# Identity:     373/463 (80.6%)
# Similarity:   373/463 (80.6%)
# Gaps:          23/463 ( 5.0%)
# Score: 1561.5
# 
#
#=======================================

BSNT_03501___      1 ATGGAAAACCGTATTGATCGAATTAAGAAACAACTGCACTCATCCAGCTA     50
                     ||||||||.||.||||||||||||||||||||.||.||.||.||||||||
BPUM_2084___f      1 ATGGAAAATCGGATTGATCGAATTAAGAAACAGCTTCATTCTTCCAGCTA     50

BSNT_03501___     51 TAAACTTACGCCACAGCGTGAAGCGACAGTAAGAGTGCTGCTTGAAAACG    100
                     |||.||.|||||||||||||||||.||||||||.||.||||||||.||.|
BPUM_2084___f     51 TAAGCTCACGCCACAGCGTGAAGCAACAGTAAGGGTACTGCTTGAGAATG    100

BSNT_03501___    101 AAGAAGACCATTTAAGCGCAGAAGATGTATACCTCCTCGTAAAAGAGAAA    150
                     ||||||||||||||||.||||||||||||||||||||||||||||||||.
BPUM_2084___f    101 AAGAAGACCATTTAAGTGCAGAAGATGTATACCTCCTCGTAAAAGAGAAG    150

BSNT_03501___    151 TCTCCTGAGATCGGTCTCGCTACAGTATACCGTACGCTTGAATTATTAAC    200
                     ||||||||.||.|||||.|||||.||.||.||.|||.|.|||||..||||
BPUM_2084___f    151 TCTCCTGAAATTGGTCTTGCTACTGTTTATCGAACGTTAGAATTGCTAAC    200

BSNT_03501___    201 TGAATTAAAAGTCGTAGATAAAATTAACTTTGGAGACGGTGTGTCCCGTT    250
                     ||||.|.|||||.||.|||||||||||||||||||||||.||.||.||.|
BPUM_2084___f    201 TGAACTGAAAGTTGTTGATAAAATTAACTTTGGAGACGGCGTTTCGCGAT    250

BSNT_03501___    251 ACGACCTTCGGAAAGAGGGCGCAGCTCACTTTCATCACCA-CTTGGTGTG    299
                     |.||.|||||.|||||.||.||.||||||||.|||||.|| ||| ||.||
BPUM_2084___f    251 ATGATCTTCGCAAAGAAGGAGCCGCTCACTTCCATCATCATCTT-GTCTG    299

BSNT_03501___    300 TATGGAGTGCGGAGCCGTTGATGAAATTGAAGAAGATTTGCTTGAAGACG    349
                     .|||||||||||..|.||.|||||.||.|||||.|||||..|.|||||||
BPUM_2084___f    300 CATGGAGTGCGGGACAGTCGATGAGATAGAAGATGATTTATTAGAAGACG    349

BSNT_03501___    350 TGGAAGAAATCATTGAACGTGATTGGAAATTTAAGATTAAAGATCATAGA    399
                     |.|||||.||.|||||||||||.|||||||||||.|||||.|||||||||
BPUM_2084___f    350 TTGAAGAGATTATTGAACGTGACTGGAAATTTAAAATTAAGGATCATAGA    399

BSNT_03501___    400 TTGACGTTTCACGGCATTTGCCACCGCTGTAA------------CGGAAA    437
                     |||||.||.||.||||||||||||||.|||.|            |||.||
BPUM_2084___f    400 TTGACATTCCATGGCATTTGCCACCGGTGTCATGATGATGAATCCGGCAA    449

BSNT_03501___    438 AGAAACTGAATAG    450
                     |.||         
BPUM_2084___f    450 ATAA---------    453


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