Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03491 and BPUM_2078
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:00
# Commandline: needle
# -asequence dna-align/BSNT_03491___spoIIAA.1.24716.seq
# -bsequence dna-align/BPUM_2078___spoIIAA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03491___spoIIAA-BPUM_2078___spoIIAA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03491___spoIIAA-BPUM_2078___spoIIAA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03491___spoIIAA
# 2: BPUM_2078___spoIIAA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 358
# Identity: 271/358 (75.7%)
# Similarity: 271/358 (75.7%)
# Gaps: 8/358 ( 2.2%)
# Score: 978.0
#
#
#=======================================
BSNT_03491___ 1 ATGAGCCTTGGAATTGACATGAATGTCAAAGA-ATCTGTGCTTTGTATTC 49
||||||||||..|||||..|..|.||.||||| |.| ||.|||||.||||
BPUM_2078___s 1 ATGAGCCTTGATATTGATTTTCAAGTAAAAGAGAGC-GTACTTTGCATTC 49
BSNT_03491___ 50 GATTAACAGGCGAACTCGATCACCATACGGCTGAAACCCTGAAGCAAAAA 99
||||||||||.||.||||||||.||..|.||.|||||..|||..|||||.
BPUM_2078___s 50 GATTAACAGGAGAGCTCGATCATCACTCCGCAGAAACATTGAGACAAAAG 99
BSNT_03491___ 100 GTGACTCAATCA-TTGGAGAAGGATGATATTCGCCATATCGTGCTGAACT 148
||||| .|||.| |||||.|..||.||.||||||||.||.||||||||.|
BPUM_2078___s 100 GTGAC-GAATTATTTGGAAACAGAGGACATTCGCCACATTGTGCTGAATT 148
BSNT_03491___ 149 TGGAGGACCTTT--CCTTTATGGACAGCTCGGGGCTTGGCGTTATTTTAG 196
|||..|| ||| |.||||||||||||||.||.||.||.||.|||||||
BPUM_2078___s 149 TGGCTGA--TTTAACGTTTATGGACAGCTCAGGTCTCGGAGTGATTTTAG 196
BSNT_03491___ 197 GAAGATACAAGCAAATTAAGCAAATTGGCGGGGAAATGGTCGTTTGCGCT 246
|||||||.||..||||||||||..||||.||.|||||||||||.||.|||
BPUM_2078___s 197 GAAGATATAAAGAAATTAAGCAGCTTGGTGGAGAAATGGTCGTCTGTGCT 246
BSNT_03491___ 247 ATCTCTCCTGCGGTGAAGCGATTGTTTGATATGTCGGGTCTGTTTAAAAT 296
|||||.||.||.||.||..|.||.|||||||||||.||..|.||||||||
BPUM_2078___s 247 ATCTCGCCAGCAGTAAACAGGTTATTTGATATGTCTGGCTTATTTAAAAT 296
BSNT_03491___ 297 TATCCGATTTGAACAATCTGAACAGCAGGCGCTCCTGACACTGGGGGTGG 346
||||||..|.||.|..||.||.||...|||..|.|..|||.|||||||||
BPUM_2078___s 297 TATCCGTATGGAGCCTTCAGAGCAAACGGCATTGCAAACATTGGGGGTGG 346
BSNT_03491___ 347 CATCATGA 354
||||||||
BPUM_2078___s 347 CATCATGA 354
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