Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03490 and BPUM_2077
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:00
# Commandline: needle
# -asequence dna-align/BSNT_03490___spoIIAB.1.24716.seq
# -bsequence dna-align/BPUM_2077___spoIIAB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03490___spoIIAB-BPUM_2077___spoIIAB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03490___spoIIAB-BPUM_2077___spoIIAB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03490___spoIIAB
# 2: BPUM_2077___spoIIAB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 446
# Identity: 354/446 (79.4%)
# Similarity: 354/446 (79.4%)
# Gaps: 10/446 ( 2.2%)
# Score: 1361.0
#
#
#=======================================
BSNT_03490___ 1 ATGAAAAATGAAATGCACCTTGA-GTTTTCTGCCCTCAGTCAGAATGAAT 49
||||..|||||||||.||| ||| .||.|||||..|.|||||.|||||||
BPUM_2077___s 1 ATGAGGAATGAAATGAACC-TGACATTCTCTGCTTTAAGTCAAAATGAAT 49
BSNT_03490___ 50 CGTTCGCCCGTGTGACAGTTGCATCATTTATAGCTCAGCTGGACCCGACA 99
|.||.||..|.||||||||.||..|||||||.||||||||.||.||||||
BPUM_2077___s 50 CCTTTGCGAGGGTGACAGTCGCGGCATTTATCGCTCAGCTTGATCCGACA 99
BSNT_03490___ 100 ATGGATGAACTGACTGAAATCAAAACAGTCGTGTCAGAGGCTGTCACGAA 149
.|.||||||.||||||||||.|||||.||.|||||||||||.||.||.||
BPUM_2077___s 100 TTAGATGAATTGACTGAAATTAAAACGGTTGTGTCAGAGGCGGTGACAAA 149
BSNT_03490___ 150 TGCGATTATCCATGGATATGAAGAGAACT-GTGAAGGAAAAGTTTACATT 198
..|.|||||||||||.||.||.| |||.| ..||.||.||.| |.|||.
BPUM_2077___s 150 CTCCATTATCCATGGCTACGATG-GAAATCCAGATGGCAAGG--TGCATA 196
BSNT_03490___ 199 TC--AGTGACGCTGGAAGATCATGTCGTATATATGACCATTCGTGATGAA 246
|| |||.||.||.||.||.|||||.||.||..|||||||.||.||.|||
BPUM_2077___s 197 TCGAAGTCACACTTGATGACCATGTTGTGTACCTGACCATCCGAGACGAA 246
BSNT_03490___ 247 GGCTTAGGCATTACAGATCTTGAAGAAGCCCGTCAGCCTCTATTTACGAC 296
||..|.|||||||||||||||||||||||..|.|||||.||.||.|||||
BPUM_2077___s 247 GGAATGGGCATTACAGATCTTGAAGAAGCAAGACAGCCGCTTTTCACGAC 296
BSNT_03490___ 297 TAAGCCTGAGCTT-GAGCGCTCTGGAATGGGCTTTACCATTATGGAAAAT 345
.||.||.|| ||| ||.||||||||.||||||||||||||||||||.|||
BPUM_2077___s 297 AAAACCAGA-CTTAGAACGCTCTGGCATGGGCTTTACCATTATGGAGAAT 345
BSNT_03490___ 346 TTCATGGATGATGTCAGTATCGATTCATCGCCTGAAATGGGAACAACGAT 395
||.|||||||||||||..||.||||||||.||.||||||||.|||||.||
BPUM_2077___s 346 TTTATGGATGATGTCATGATAGATTCATCTCCAGAAATGGGCACAACCAT 395
BSNT_03490___ 396 TCGCTTAACAAAGCACTTATCAAAAAGCAAAGCGCTTTGTAATTAA 441
.||.|||||||||||..|||||||||||||||||||||||||||||
BPUM_2077___s 396 CCGTTTAACAAAGCATCTATCAAAAAGCAAAGCGCTTTGTAATTAA 441
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