Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03450 and BPUM_2051
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:58
# Commandline: needle
# -asequence dna-align/BSNT_03450___spmA.1.24716.seq
# -bsequence dna-align/BPUM_2051___spmA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03450___spmA-BPUM_2051___spmA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03450___spmA-BPUM_2051___spmA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03450___spmA
# 2: BPUM_2051___spmA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 602
# Identity: 445/602 (73.9%)
# Similarity: 445/602 (73.9%)
# Gaps: 25/602 ( 4.2%)
# Score: 1580.0
#
#
#=======================================
BSNT_03450___ 1 ATGGTCAATATAATTTGGGTCAGTT--TAACCGTGATCGGACTCGTTTTT 48
|||||||||.|||||||||| .|| |.||.||.|||||.||.||.|.|
BPUM_2051___s 1 ATGGTCAATCTAATTTGGGT--ATTCCTCACTGTCATCGGTCTTGTGTAT 48
BSNT_03450___ 49 GCGATGTGCAACGGAACTCTGCAAGATGTAAATGAAGCCGTGTTTAAGGG 98
|||||||..||||||||..||.|.||.|||||.|||||.||.|||||.||
BPUM_2051___s 49 GCGATGTTTAACGGAACGATGGAGGAAGTAAACGAAGCTGTATTTAAAGG 98
BSNT_03450___ 99 TGCGAAAGAAGCGATTACGATTTCATTTGGATTGATGAGCGTGCTTGTTT 148
..|.||.||||||.|.||.||||||.||||..||||.||.||.|||||||
BPUM_2051___s 99 ATCAAAGGAAGCGGTGACCATTTCAATTGGTCTGATTAGTGTCCTTGTTT 148
BSNT_03450___ 149 TCTGGCTTGGCTTAATGAAAATCGCCGAGCAGTCAGGTCTTTTGGATATT 198
|.||||||||..|.|||||.||.||.||..||.|||||.|.||..||.|.
BPUM_2051___s 149 TTTGGCTTGGGCTGATGAAGATTGCAGAAGAGGCAGGTTTGTTAAATTTC 198
BSNT_03450___ 199 TTCAGCCGGATGTGCAGGCCTTTTATATCTAAACTGTTCCCTGATATACC 248
||.||.....|||||.|.||.|||||.||.||.||.||.||.|||||.||
BPUM_2051___s 199 TTTAGTAAATTGTGCCGTCCCTTTATTTCAAAGCTATTTCCGGATATTCC 248
BSNT_03450___ 249 GCCGGATCACCCGGCGATGGGCTATATTTTATCTAATCTTATGGCGAATT 298
|||..||||.||.||||||||.||||||||.||.|||||.||||||||||
BPUM_2051___s 249 GCCTAATCATCCTGCGATGGGATATATTTTGTCCAATCTCATGGCGAATT 298
BSNT_03450___ 299 TCTTCGGCCTCGGAAATGCAGCAACTCCGCTTGGCATTAAAGCAATGGAA 348
||||.||.|||||.|||||.||.||.||.|||||.|||||.||||||||.
BPUM_2051___s 299 TCTTTGGTCTCGGGAATGCCGCGACACCCCTTGGGATTAAGGCAATGGAG 348
BSNT_03450___ 349 CAAATGAAAAAGC--TGAACGG-----AAACCGATCGGAAGCAAGCCGGT 391
||.||| ||||| |.||||| ||| || |||||||||||||
BPUM_2051___s 349 CAGATG--AAAGCATTAAACGGCGGGAAAA---AT--GAAGCAAGCCGGT 391
BSNT_03450___ 392 CAATGATTACTTTTTTAGCTGTTAATACGTCCTGCATCACACTCATCCCG 441
|.||||||||.||||||||.||.||.||.||||..|||||||||.|.||.
BPUM_2051___s 392 CCATGATTACATTTTTAGCGGTCAACACATCCTCTATCACACTCGTGCCA 441
BSNT_03450___ 442 ACAACGGTGATCGCTGTCCGAATGGCTTATTCCTCCAAAAC-GCCGACAG 490
|||||.||.||.||..|..|||||.|.|| |..|.||.|.| |||.||||
BPUM_2051___s 442 ACAACTGTCATTGCAATTAGAATGACCTA-TGGTGCAGATCAGCCAACAG 490
BSNT_03450___ 491 ATATCGTCGGGCCAAGCATTTTGGCAACGCTTATTTCCGGAATCGGTGCC 540
|.||.||.||.||||.|||||||||.||.||.|||||.||.||.||||||
BPUM_2051___s 491 ACATTGTGGGCCCAACCATTTTGGCGACACTCATTTCAGGCATTGGTGCC 540
BSNT_03450___ 541 ATTATCATTGATCGGTATTTTTATTACCGCCGCAAAAAGAAGG-GAAGGT 589
|||.||||||||||.|||||..|.||.||| |.|||.||| |..|||
BPUM_2051___s 541 ATTCTCATTGATCGCTATTTCCACTATCGC----AGAAGCAGGCGGGGGT 586
BSNT_03450___ 590 GA 591
||
BPUM_2051___s 587 GA 588
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